Permalink
Cannot retrieve contributors at this time
Fetching contributors…
Cannot retrieve contributors at this time
| # Install | |
| ## The aroma.affymetrix package | |
| To install or update aroma.affymetrix and all required and recommended | |
| packages, start R and do: | |
| ```r | |
| source('http://callr.org/install#aroma.affymetrix') | |
| ``` | |
| That's it. (You can install any CRAN and Bioconductor package using this | |
| approach) | |
| ## News/Change logs | |
| <% | |
| pkgs <- c("aroma.affymetrix", "aroma.cn", "aroma.core", "R.filesets", "PSCBS", "future", "future.BatchJobs") | |
| %> | |
| <% for (pkg in pkgs) { %> | |
| - [<%=pkg%>](http://cran.r-project.org/package=<%=pkg%>): | |
| [NEWS](http://cran.r-project.org/web/packages/<%=pkg%>/NEWS) | |
| <% } %> | |
| - [aroma.light](http://bioconductor.org/packages/aroma.light): | |
| [NEWS](http://bioconductor.org/packages/release/bioc/news/aroma.light/NEWS) | |
| - [affxparser](http://bioconductor.org/packages/affxparser): | |
| [NEWS](http://bioconductor.org/packages/release/bioc/news/affxparser/NEWS) | |
| - [sfit](https://github.com/HenrikBengtsson/sfit): | |
| [NEWS](https://raw.githubusercontent.com/HenrikBengtsson/sfit/master/NEWS) | |
| - aroma - Are you looking for the original aroma package that | |
| processes spotted microarrays? Then please see its | |
| [installation](<%=pathTo('/packages/aroma/')%>) instructions. | |
| ## Requirements | |
| - Software: [R](http://www.r-project.org/) | |
| - Operating system: Linux, OS X, Windows, ... (any that runs R) | |
| - Memory: Minimum 500 MiB of RAM. Recommended \> 1 GiB. | |
| - Disk space: Roughly 3-5 times the total size of your raw data files. | |
| ## License | |
| Unless stated otherwise, the aroma.* and R.* packages are distributed | |
| under the [LGPL v2.1](http://www.gnu.org/licenses/lgpl-2.1.html) | |
| license, and the documentation on this site is published under the [GFPL | |
| v1.3](http://www.gnu.org/copyleft/fdl.html) license. Copyright holder is | |
| Henrik Bengtsson and/or the original author of the artifact. |