Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Example Files for xyz #16

Closed
Sulstice opened this issue Mar 7, 2021 · 1 comment
Closed

Example Files for xyz #16

Sulstice opened this issue Mar 7, 2021 · 1 comment
Labels

Comments

@Sulstice
Copy link

Sulstice commented Mar 7, 2021

To reach a wider audience - it would be helpful to have a wider set of example files otherwise I am digging through your test directory.

Some folk, and I picked this up from MDAnalysis will come with prepared files within the package. You can choose to include yours in there for the example in the Coordination and Numbers and Sphere's page.


alanine-glycine.xyz

If someone isn't familiar with the xmol format it is also worth it to place in there as well in the docs - you could also link to the test file but most folk don't wanna flood the system with another file they have to coordinate - they like it compartmentalized.

@f3rmion f3rmion added this to To do in Roadmap 2021 Mar 7, 2021
@f3rmion f3rmion added the JOSS label Mar 9, 2021
@f3rmion
Copy link
Member

f3rmion commented Mar 9, 2021

Hi @Sulstice,

I have expanded the examples and linked to the xmol Wikipedia page.
Furthermore, I linked to the MolPol135 benchmark set that I have extracted recently from the literature.
All geometries are optimized at the CAM-B3LYP-D3(B)/def2-TZVP level of theory and available in an xmol format.

JOSS

@f3rmion f3rmion closed this as completed Mar 9, 2021
@f3rmion f3rmion moved this from To do to Done in Roadmap 2021 Mar 10, 2021
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
Projects
Development

No branches or pull requests

2 participants