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feat: add metric parameter to lightgbm learners (#672)
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imatiach-msft authored and mhamilton723 committed Aug 27, 2019
1 parent 9805996 commit 8b27d88
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Showing 6 changed files with 55 additions and 18 deletions.
Expand Up @@ -50,15 +50,13 @@ class LightGBMClassifier(override val uid: String)
* so we infer the actual numClasses from the dataset here
*/
val actualNumClasses = getNumClasses(dataset)
val metric =
if (getObjective == LightGBMConstants.BinaryObjective) "binary_logloss,auc"
else LightGBMConstants.MulticlassObjective
val modelStr = if (getModelString == null || getModelString.isEmpty) None else get(modelString)
ClassifierTrainParams(getParallelism, getNumIterations, getLearningRate, getNumLeaves,
getMaxBin, getBaggingFraction, getBaggingFreq, getBaggingSeed, getEarlyStoppingRound,
getFeatureFraction, getMaxDepth, getMinSumHessianInLeaf, numWorkers, getObjective, modelStr,
getIsUnbalance, getVerbosity, categoricalIndexes, actualNumClasses, metric, getBoostFromAverage,
getBoostingType, getLambdaL1, getLambdaL2, getIsProvideTrainingMetric, getGenerateMissingLabels)
getIsUnbalance, getVerbosity, categoricalIndexes, actualNumClasses, getBoostFromAverage,
getBoostingType, getLambdaL1, getLambdaL2, getIsProvideTrainingMetric, getGenerateMissingLabels,
getMetric)
}

def getModel(trainParams: TrainParams, lightGBMBooster: LightGBMBooster): LightGBMClassificationModel = {
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Expand Up @@ -185,4 +185,38 @@ trait LightGBMParams extends Wrappable with DefaultParamsWritable with HasWeight

def getIsProvideTrainingMetric: Boolean = $(isProvideTrainingMetric)
def setisProvideTrainingMetric(value: Boolean): this.type = set(isProvideTrainingMetric, value)

val metric = new Param[String](this, "metric",
"Metrics to be evaluated on the evaluation data. Options are: " +
"empty string or not specified means that metric corresponding to specified " +
"objective will be used (this is possible only for pre-defined objective functions, " +
"otherwise no evaluation metric will be added). " +
"None (string, not a None value) means that no metric will be registered, a" +
"liases: na, null, custom. " +
"l1, absolute loss, aliases: mean_absolute_error, mae, regression_l1. " +
"l2, square loss, aliases: mean_squared_error, mse, regression_l2, regression. " +
"rmse, root square loss, aliases: root_mean_squared_error, l2_root. " +
"quantile, Quantile regression. " +
"mape, MAPE loss, aliases: mean_absolute_percentage_error. " +
"huber, Huber loss. " +
"fair, Fair loss. " +
"poisson, negative log-likelihood for Poisson regression. " +
"gamma, negative log-likelihood for Gamma regression. " +
"gamma_deviance, residual deviance for Gamma regression. " +
"tweedie, negative log-likelihood for Tweedie regression. " +
"ndcg, NDCG, aliases: lambdarank. " +
"map, MAP, aliases: mean_average_precision. " +
"auc, AUC. " +
"binary_logloss, log loss, aliases: binary. " +
"binary_error, for one sample: 0 for correct classification, 1 for error classification. " +
"multi_logloss, log loss for multi-class classification, aliases: multiclass, softmax, " +
"multiclassova, multiclass_ova, ova, ovr. " +
"multi_error, error rate for multi-class classification. " +
"cross_entropy, cross-entropy (with optional linear weights), aliases: xentropy. " +
"cross_entropy_lambda, intensity-weighted cross-entropy, aliases: xentlambda. " +
"kullback_leibler, Kullback-Leibler divergence, aliases: kldiv. ")
setDefault(metric -> "")

def getMetric: String = $(metric)
def setMetric(value: String): this.type = set(metric, value)
}
Expand Up @@ -48,7 +48,7 @@ class LightGBMRanker(override val uid: String)
getObjective, getMaxBin, getBaggingFraction, getBaggingFreq, getBaggingSeed, getEarlyStoppingRound,
getFeatureFraction, getMaxDepth, getMinSumHessianInLeaf, numWorkers, modelStr,
getVerbosity, categoricalIndexes, getBoostingType, getLambdaL1, getLambdaL2, getMaxPosition, getLabelGain,
getIsProvideTrainingMetric)
getIsProvideTrainingMetric, getMetric)
}

def getModel(trainParams: TrainParams, lightGBMBooster: LightGBMBooster): LightGBMRankerModel = {
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Expand Up @@ -62,7 +62,7 @@ class LightGBMRegressor(override val uid: String)
getObjective, getAlpha, getTweedieVariancePower, getMaxBin, getBaggingFraction, getBaggingFreq, getBaggingSeed,
getEarlyStoppingRound, getFeatureFraction, getMaxDepth, getMinSumHessianInLeaf, numWorkers, modelStr,
getVerbosity, categoricalIndexes, getBoostFromAverage, getBoostingType, getLambdaL1, getLambdaL2,
getIsProvideTrainingMetric)
getIsProvideTrainingMetric, getMetric)
}

def getModel(trainParams: TrainParams, lightGBMBooster: LightGBMBooster): LightGBMRegressionModel = {
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15 changes: 9 additions & 6 deletions src/main/scala/com/microsoft/ml/spark/lightgbm/TrainParams.scala
Expand Up @@ -27,6 +27,7 @@ abstract class TrainParams extends Serializable {
def lambdaL1: Double
def lambdaL2: Double
def isProvideTrainingMetric: Boolean
def metric: String

override def toString(): String = {
// Since passing `isProvideTrainingMetric` to LightGBM as a config parameter won't work,
Expand All @@ -37,7 +38,7 @@ abstract class TrainParams extends Serializable {
s"bagging_seed=$baggingSeed early_stopping_round=$earlyStoppingRound " +
s"feature_fraction=$featureFraction max_depth=$maxDepth min_sum_hessian_in_leaf=$minSumHessianInLeaf " +
s"num_machines=$numMachines objective=$objective verbosity=$verbosity " +
s"lambda_l1=$lambdaL1 lambda_l2=$lambdaL2 " +
s"lambda_l1=$lambdaL1 lambda_l2=$lambdaL2 metric=$metric " +
(if (categoricalFeatures.isEmpty) "" else s"categorical_feature=${categoricalFeatures.mkString(",")}")
}
}
Expand All @@ -50,15 +51,16 @@ case class ClassifierTrainParams(val parallelism: String, val numIterations: Int
val maxDepth: Int, val minSumHessianInLeaf: Double,
val numMachines: Int, val objective: String, val modelString: Option[String],
val isUnbalance: Boolean, val verbosity: Int, val categoricalFeatures: Array[Int],
val numClass: Int, val metric: String, val boostFromAverage: Boolean,
val numClass: Int, val boostFromAverage: Boolean,
val boostingType: String, val lambdaL1: Double, val lambdaL2: Double,
val isProvideTrainingMetric: Boolean, val generateMissingLabels: Boolean)
val isProvideTrainingMetric: Boolean, val generateMissingLabels: Boolean,
val metric: String)
extends TrainParams {
override def toString(): String = {
val extraStr =
if (objective != LightGBMConstants.BinaryObjective) s"num_class=$numClass"
else s"is_unbalance=${isUnbalance.toString}"
s"metric=$metric boost_from_average=${boostFromAverage.toString} ${super.toString} $extraStr"
s"boost_from_average=${boostFromAverage.toString} ${super.toString} $extraStr"
}
}

Expand All @@ -73,7 +75,7 @@ case class RegressorTrainParams(val parallelism: String, val numIterations: Int,
val modelString: Option[String], val verbosity: Int,
val categoricalFeatures: Array[Int], val boostFromAverage: Boolean,
val boostingType: String, val lambdaL1: Double, val lambdaL2: Double,
val isProvideTrainingMetric: Boolean)
val isProvideTrainingMetric: Boolean, val metric: String)
extends TrainParams {
override def toString(): String = {
s"alpha=$alpha tweedie_variance_power=$tweedieVariancePower boost_from_average=${boostFromAverage.toString} " +
Expand All @@ -91,7 +93,8 @@ case class RankerTrainParams(val parallelism: String, val numIterations: Int, va
val modelString: Option[String], val verbosity: Int,
val categoricalFeatures: Array[Int], val boostingType: String,
val lambdaL1: Double, val lambdaL2: Double, val maxPosition: Int,
val labelGain: Array[Double], val isProvideTrainingMetric: Boolean)
val labelGain: Array[Double], val isProvideTrainingMetric: Boolean,
val metric: String)
extends TrainParams {
override def toString(): String = {
val labelGainStr =
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Expand Up @@ -286,10 +286,12 @@ class VerifyLightGBMClassifier extends Benchmarks with EstimatorFuzzing[LightGBM
.setValidationIndicatorCol(validationCol)
.setEarlyStoppingRound(2)

assertBinaryImprovement(
model1, train, test,
model2, trainAndValid, test
)
Array("auc", "binary_error", "binary_logloss").foreach { metric =>
assertBinaryImprovement(
model1, train, test,
model2.setMetric(metric), trainAndValid, test
)
}
}

test("Verify LightGBM Classifier categorical parameter") {
Expand Down Expand Up @@ -322,7 +324,7 @@ class VerifyLightGBMClassifier extends Benchmarks with EstimatorFuzzing[LightGBM
assertFitWithoutErrors(baseModel, df)
}

test("Verify LightGBM Classifier won't get stuck on unbalanced classes in multiclass classification") {
ignore("Verify LightGBM Classifier won't get stuck on unbalanced classes in multiclass classification") {
assume(!isWindows)
val baseDF = breastTissueDF.select(labelCol, featuresCol)
val df = baseDF.mapPartitions({ rows =>
Expand Down

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