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Using other Cellpose 2.0 built-in models ? #19

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ofrag opened this issue Dec 21, 2022 · 2 comments
Closed

Using other Cellpose 2.0 built-in models ? #19

ofrag opened this issue Dec 21, 2022 · 2 comments

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@ofrag
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ofrag commented Dec 21, 2022

Hi,

Thanks for the great Cellpose extension !
I have data for which other built-in Cellpose models work better than cyto2 (tissuenet, TN1, TN2, TN3)
I wonder if you can add an option to use all the models built-in cellpose 2.0.

Thanks
Ofra

@lacan
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lacan commented Jan 16, 2023

Hi Ofra, as far as I know, all models are available, the examples given are not complete. If it has a string that you can use from the command line of cellpose, then you can call it from the QuPath extension.

Do you have an example of when it does not work?

Oli

@lacan
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lacan commented Apr 20, 2023

Closing this from lack of activity

@lacan lacan closed this as completed Apr 20, 2023
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