.. py:class:: MarkovSolverBase
Solver for Markov Channel.
.. py:attribute:: channel
void (*shared message field*) This message couples the MarkovSolverBase to the Compartment. The compartment needs Vm in order to look up the correct matrix exponential for computing the state.
.. py:attribute:: proc
void (*shared message field*) This is a shared message to receive Process message from thescheduler. The first entry is a MsgDest for the Process operation. It has a single argument, ProcInfo, which holds lots of information about current time, thread, dt andso on. The second entry is a MsgDest for the Reinit operation. It also uses ProcInfo.
.. py:method:: handleVm
(*destination message field*) Handles incoming message containing voltage information.
.. py:method:: process
(*destination message field*) Handles process call
.. py:method:: reinit
(*destination message field*) Handles reinit call
.. py:method:: ligandConc
(*destination message field*) Handles incoming message containing ligand concentration.
.. py:method:: init
(*destination message field*) Setups the table of matrix exponentials associated with the solver object.
.. py:method:: getQ
(*destination message field*) Requests field value. The requesting Element must provide a handler for the returned value.
.. py:method:: getState
(*destination message field*) Requests field value. The requesting Element must provide a handler for the returned value.
.. py:method:: setInitialState
(*destination message field*) Assigns field value.
.. py:method:: getInitialState
(*destination message field*) Requests field value. The requesting Element must provide a handler for the returned value.
.. py:method:: setXmin
(*destination message field*) Assigns field value.
.. py:method:: getXmin
(*destination message field*) Requests field value. The requesting Element must provide a handler for the returned value.
.. py:method:: setXmax
(*destination message field*) Assigns field value.
.. py:method:: getXmax
(*destination message field*) Requests field value. The requesting Element must provide a handler for the returned value.
.. py:method:: setXdivs
(*destination message field*) Assigns field value.
.. py:method:: getXdivs
(*destination message field*) Requests field value. The requesting Element must provide a handler for the returned value.
.. py:method:: getInvdx
(*destination message field*) Requests field value. The requesting Element must provide a handler for the returned value.
.. py:method:: setYmin
(*destination message field*) Assigns field value.
.. py:method:: getYmin
(*destination message field*) Requests field value. The requesting Element must provide a handler for the returned value.
.. py:method:: setYmax
(*destination message field*) Assigns field value.
.. py:method:: getYmax
(*destination message field*) Requests field value. The requesting Element must provide a handler for the returned value.
.. py:method:: setYdivs
(*destination message field*) Assigns field value.
.. py:method:: getYdivs
(*destination message field*) Requests field value. The requesting Element must provide a handler for the returned value.
.. py:method:: getInvdy
(*destination message field*) Requests field value. The requesting Element must provide a handler for the returned value.
.. py:attribute:: stateOut
vector<double> (*source message field*) Sends updated state to the MarkovChannel class.
.. py:attribute:: Q
vector< vector<double> > (*value field*) Instantaneous rate matrix.
.. py:attribute:: state
vector<double> (*value field*) Current state of the channel.
.. py:attribute:: initialState
vector<double> (*value field*) Initial state of the channel.
.. py:attribute:: xmin
double (*value field*) Minimum value for x axis of lookup table
.. py:attribute:: xmax
double (*value field*) Maximum value for x axis of lookup table
.. py:attribute:: xdivs
unsigned int (*value field*) # of divisions on x axis of lookup table
.. py:attribute:: invdx
double (*value field*) Reciprocal of increment on x axis of lookup table
.. py:attribute:: ymin
double (*value field*) Minimum value for y axis of lookup table
.. py:attribute:: ymax
double (*value field*) Maximum value for y axis of lookup table
.. py:attribute:: ydivs
unsigned int (*value field*) # of divisions on y axis of lookup table
.. py:attribute:: invdy
double (*value field*) Reciprocal of increment on y axis of lookup table