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bibsource.txt
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bibsource.txt
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@ARTICLE{\2_\5_\3,
AUTHOR = {\1},
TITLE = {\4},
YEAR = {\3},
JOURNAL = {\6},
VOLUME = {\7},
PAGES = {\8}
}
@ARTICLE{\2_\5_\3,\n\tAUTHOR = {\1},\n\tTITLE = {\4},\n\tYEAR = {\3},\n\tJOURNAL = {\6},\n\tVOLUME = {\7},\n\tPAGES = {\8}\n}
^ *(([A-Za-z]+)[^(]+)\(([0-9]+)\) ?[.,]? *(([A-Za-z]+)?[^\\]+)\\textit\{([^}]+)\}[^0-9]*([0-9]+)[^0-9]*(.*)$
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Allawi H.T., SantaLucia J. (1998). Nearest Neighbor thermodynamics of internal A.C mismatches in DNA: sequence dependence and pH effects.\textit{Biochemistry} 37: 9435-9444.
Amanda S. O'toole, Stacy Miller and Martin J Serra (2005), Stability of 3' double nucleotide overhangs that model the 3'ends of siRNA. \textit{RNA} 11: 512-516
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Hiroyuki Asanuma, Daijiro Matsunaga and Makoto Komiyama (2005), Clear-cut photo-regulation of the formation and dissociation of the DNA duplex by modified oligonucleotide involving multiple azobenzenes.\textit{Nucleic acids Symposium Series} 49 : 35-36
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Joshua M. Blose, Michelle L. Manni, Kelly A. Klapec, Yukiko Stranger-Jones, Allison C.Zyra, Vasiliy Sim, Chad A. Griffith, Jason D. Long, and Martin J. Serra (2007) Non-Nearest-Neighbor Dependence of Stability for RNA Bulge Loops Based on the Complete Set of Group I Single Nucleotide Bulge Loops.\textit{Biochemistry} 46 : 15123-15135
Junji Kawakami1,2, Hiroyuki Kamiya3, Kyohko Yasuda2, Hiroyoshi Fujiki1, Hiroshi Kasai3 andNaoki Sugimoto (2001), Thermodynamic stability of base pairs between 2-hydroxyadenine and incoming nucleotides as a determinant of nucleotide incorporation specificity during replication.\textit{Nucleic acids research} 29 : 3289-3296
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Owczarzy R., Moreira B.G., You Y., Behlke M.B., Walder J.A.(2008) Predicting stability of DNA duplexes in solutions containing Magnesium and Monovalent Cations. \textit{Biochemistry} 47: 5336-5353.
Patricia M. McTigue, Raymond J. Peterson, and Jason D. Kahn (2004) Sequence-Dependent Thermodynamic Parameters for Locked Nucleic Acid (LNA)DNA DuplexFormation.\textit{Biochemistry} 43 : 5388-5405
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Peyret N., Seneviratne P.A., Allawi H.T., SantaLucia J. (1999). Nearest Neighbor thermodynamics and NMR of DNA sequences with internal A.A, C.C, G.G and T.T mismatches. dependence and pH effects.\textit{Biochemistry} 38: 3468-3477
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Stacy Miller, Laura E. Jones, Karen Giovannitti, Dan Piper and Martin J. Serra (2008)Thermodynamic analysis of 5 and 3 single- and 3 double-nucleotide overhangs neighboring wobble terminal base pairs.\textit{Nucleic Acids research} 36: 5652-5659
****************Sugimoto N., Katoh M., Nakano S., Ohmichi T., Sasaki M. (1994). RNA/DNA hybrid duplexes with identical nearest-neighbor base-pairs hve identical stability. \textit{FEBS Letters} 354: 74-78
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