-
Notifications
You must be signed in to change notification settings - Fork 1
/
pYPK0_PGI_ScXKS1_FBA1.gb
277 lines (277 loc) · 16.4 KB
/
pYPK0_PGI_ScXKS1_FBA1.gb
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
LOCUS pYPK0_tp_g_tp 9223 bp DNA circular UNK 26-JUN-2017
DEFINITION pYPK0_PGI_ScXKS1_FBA1
cSEGUID_R5OEqb-2ZLrJfiIM9r80CFLI5H4_2017-06-26T06:18:55.914231
ACCESSION id?
VERSION id?
KEYWORDS .
SOURCE .
ORGANISM .
.
FEATURES Location/Qualifiers
overlap 363..486
/ApEinfo_fwdcolor="#CFD8BD"
/ApEinfo_revcolor="#AFF9B0"
/chksum="GqXRnFdj0bUssSD9FyJPEMLnbh0"
/note="olp_GqXRnFdj0bUssSD9FyJPEMLnbh0"
primer_bind complement(458..486)
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="865_pYPKpwR"
misc 531..557
/label="fw1000"
primer_bind 537..557
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="<unknown name>"
misc 537..557
/label="<unknown id>"
primer_bind 537..557
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="fw1000"
primer_bind complement(1517..1536)
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="<unknown name>"
misc complement(1517..1536)
/label="<unknown id>"
primer_bind complement(1517..1536)
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="rv1000"
misc complement(1517..1543)
/label="rv1000"
overlap 1561..1593
/ApEinfo_fwdcolor="#C2E0E2"
/ApEinfo_revcolor="#B4BCCD"
/chksum="RgyAAlzwLTqslLOd_uGXCChs9_M"
/note="olp_RgyAAlzwLTqslLOd_uGXCChs9_M"
primer_bind complement(1571..1591)
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="567_pCAPsAjiIF"
misc complement(1571..1593)
/label="567_pCAPsAjiIF"
primer_bind complement(1571..1593)
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="567"
misc complement(1571..1593)
/label="567"
primer_bind 1596..1616
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="fw1803"
primer_bind complement(3378..3398)
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="rv1803"
misc complement(3378..3431)
/label="rv1803"
overlap 3399..3431
/ApEinfo_fwdcolor="#C8E1CB"
/ApEinfo_revcolor="#C9C2CE"
/chksum="bPjSh7bhYBy094w3Pdmi7AtjghA"
/note="olp_bPjSh7bhYBy094w3Pdmi7AtjghA"
primer_bind 3436..3463
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="<unknown name>"
misc 3436..3463
/label="<unknown id>"
primer_bind 3436..3463
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="fw630"
primer_bind complement(4041..4065)
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="<unknown name>"
misc complement(4041..4065)
/label="<unknown id>"
primer_bind complement(4041..4065)
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="rv630"
misc complement(4041..4072)
/label="rv630"
overlap 4126..4367
/ApEinfo_fwdcolor="#C9B1E6"
/ApEinfo_revcolor="#E7EEC8"
/chksum="WozPxSoJjWK29v8yQeT4MATRraA"
/note="olp_WozPxSoJjWK29v8yQeT4MATRraA"
primer_bind complement(4339..4367)
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="578"
misc complement(4339..4367)
/label="578"
rep_origin 4774
/ApEinfo_fwdcolor="cyan"
/ApEinfo_revcolor="red"
/direction=BOTH
/label="feat1"
misc complement(5518..6321)
/ApEinfo_fwdcolor="cyan"
/ApEinfo_revcolor="red"
/label="URA3"
CDS complement(8170..8828)
/ApEinfo_fwdcolor="cyan"
/ApEinfo_revcolor="red"
/label="AmpR"
ORIGIN
1 tcgcgcgttt cggtgatgac ggtgaaaacc tctgacacat gcagctcccg gagacggtca
61 cagcttgtct gtaagcggat gccgggagca gacaagcccg tcagggcgcg tcagcgggtg
121 ttggcgggtg tcggggctgg cttaactatg cggcatcaga gcagattgta ctgagagtgc
181 accatagatc ctgaggatcg gggtgataaa tcagtctgcg ccacatcggg ggaaacaaaa
241 tggcgcgaga tctaaaaaaa aaggctccaa aaggagcctt tcgcgctacc aggtaacgcg
301 ccactccgac gggattaacg agtgccgtaa acgacgatgg ttttaccgtg tgcggagatc
361 aggttctgat cctcgagcat cttaagaatt cgtcccacgg tttgtctaga gcagccgaca
421 atctggccaa tttcctgacg ggtaattttg atttgcatgc cgtccgggtg agtcatagcg
481 tctggttgtt ttgccagatt cagcagagtc tgtgcaatgc ggccgctgac ttaaataatt
541 cagttttctg actgagttaa aaactaatgt agcgacacca cttccattgg tgcctccgtt
601 attttttttt tgtatgttaa tgctaaataa tacaccgcta tgtatttcag ggcactactt
661 ctacacatca acggtactaa acatttcgct caagatcggt ccgctttcac gtatttggat
721 gctatgcaat gttgactatt cttagtggat aacatgcggc atttcctggc ggctatttgc
781 atcgctatgt aagtggcaat gttcggatgt gggtagtact ttcaaaagaa aaaatattac
841 tgaagaaggc atactacgcc aagactattt tattctcagc acttgtccta cgtggggtta
901 gaggcgagta agactttggc cccgctgcgg aagcaaagag aattttgcca tcggacatgc
961 taccttacgc ttatatctct cattggaata tcgttttctg attaaaacac ggaagtaaga
1021 acttaattcg tttttcgttg aactatgttg tgccagcgta acattaaaaa agagtgtaca
1081 aggccacgtt ctgtcaccgt cagaaaaata tgtcaatgag gcaagaaccg ggatggtaac
1141 aaaaatcacg atctgggtgg gtgtgggtgt attggattat aggaagccac gcgctcaacc
1201 tggaattaca ggaagctggt aattttttgg gtttgcaatc atcaccatct gcacgttgtt
1261 ataatgtccc gtgtctatat atatccattg acggtattct atttttttgc tattgaaatg
1321 agcgtttttt gttactacaa ttggttttac agacggaatt ttccctattt gtttcgtccc
1381 atttttcctt ttctcattgt tctcatatct taaaaaggtc ctttcttcat aatcaatgct
1441 ttcttttact taatatttta cttgcattca gtgaatttta atacatattc ctctagtctt
1501 gcaaaatcga tttagaatca agataccagc ctaaaattaa ttagtcgagg aacgccaggt
1561 tgcccacttt ctcactagtg acctgcagcc gacaaatgtt gtgttcagta attcagagac
1621 agacaagaga ggtttccaac acaatgtctt tagactcata ctatcttggg tttgatcttt
1681 cgacccaaca actgaaatgt ctcgccatta accaggacct aaaaattgtc cattcagaaa
1741 cagtggaatt tgaaaaggat cttccgcatt atcacacaaa gaagggtgtc tatatacacg
1801 gcgacactat cgaatgtccc gtagccatgt ggttagaggc tctagatctg gttctctcga
1861 aatatcgcga ggctaaattt ccattgaaca aagttatggc cgtctcaggg tcctgccagc
1921 agcacgggtc tgtctactgg tcctcccaag ccgaatctct gttagagcaa ttgaataaga
1981 aaccggaaaa agatttattg cactacgtga gctctgtagc atttgcaagg caaaccgccc
2041 ccaattggca agaccacagt actgcaaagc aatgtcaaga gtttgaagag tgcataggtg
2101 ggcctgaaaa aatggctcaa ttaacagggt ccagagccca ttttagattt actggtcctc
2161 aaattctgaa aattgcacaa ttagaaccag aagcttacga aaaaacaaag accatttctt
2221 tagtgtctaa ttttttgact tctatcttag tgggccatct tgttgaatta gaggaggcag
2281 atgcctgtgg tatgaacctt tatgatatac gtgaaagaaa attcagtgat gagctactac
2341 atctaattga tagttcttct aaggataaaa ctatcagaca aaaattaatg agagcaccca
2401 tgaaaaattt gatagcgggt accatctgta aatattttat tgagaagtac ggtttcaata
2461 caaactgcaa ggtctctccc atgactgggg ataatttagc cactatatgt tctttacccc
2521 tgcggaagaa tgacgttctc gtttccctag gaacaagtac tacagttctt ctggtcaccg
2581 ataagtatca cccctctccg aactatcatc ttttcattca tccaactctg ccaaaccatt
2641 atatgggtat gatttgttat tgtaatggtt ctttggcaag ggagaggata agagacgagt
2701 taaacaaaga acgggaaaat aattatgaga agactaacga ttggactctt tttaatcaag
2761 ctgtgctaga tgactcagaa agtagtgaaa atgaattagg tgtatatttt cctctggggg
2821 agatcgttcc tagcgtaaaa gccataaaca aaagggttat cttcaatcca aaaacgggta
2881 tgattgaaag agaggtggcc aagttcaaag acaagaggca cgatgccaaa aatattgtag
2941 aatcacaggc tttaagttgc agggtaagaa tatctcccct gctttcggat tcaaacgcaa
3001 gctcacaaca gagactgaac gaagatacaa tcgtgaagtt tgattacgat gaatctccgc
3061 tgcgggacta cctaaataaa aggccagaaa ggactttttt tgtaggtggg gcttctaaaa
3121 acgatgctat tgtgaagaag tttgctcaag tcattggtgc tacaaagggt aattttaggc
3181 tagaaacacc aaactcatgt gcccttggtg gttgttataa ggccatgtgg tcattgttat
3241 atgactctaa taaaattgca gttccttttg ataaatttct gaatgacaat tttccatggc
3301 atgtaatgga aagcatatcc gatgtggata atgaaaattg ggatcgctat aattccaaga
3361 ttgtcccctt aagcgaactg gaaaagactc tcatctaagt gccatctgtg cagacaaacg
3421 catcaggatt taaatataac aatactgaca gtactaaata attgcctact tggcttcaca
3481 tacgttgcat acgtcgatat agataataat gataatgaca gcaggattat cgtaatacgt
3541 aatagttgaa aatctcaaaa atgtgtgggt cattacgtaa ataatgatag gaatgggatt
3601 cttctatttt tcctttttcc attctagcag ccgtcgggaa aacgtggcat cctctctttc
3661 gggctcaatt ggagtcacgc tgccgtgagc atcctctctt tccatatcta acaactgagc
3721 acgtaaccaa tggaaaagca tgagcttagc gttgctccaa aaaagtattg gatggttaat
3781 accatttgtc tgttctcttc tgactttgac tcctcaaaaa aaaaaaatct acaatcaaca
3841 gatcgcttca attacgccct cacaaaaact tttttccttc ttcttcgccc acgttaaatt
3901 ttatccctca tgttgtctaa cggatttctg cacttgattt attataaaaa gacaaagaca
3961 taatacttct ctatcaattt cagttattgt tcttccttgc gttattcttc tgttcttctt
4021 tttcttttgt catatataac cataaccaag taatacatat tcaaattaat taatccggat
4081 ttacctgaat caattggcga aattttttgt acgaaatttc agccacttca caggcggttt
4141 tcgcacgtac ccatgcgcta cgttcctggc cctcttcaaa caggcccagt tcgccaataa
4201 aatcaccctg attcagatag gagaggatca tttctttacc ctcttcgtct ttgatcagca
4261 ctgccacaga gcctttaacg atgtagtaca gcgtttccgc tttttcaccc tggtgaataa
4321 gcgtgctctt ggatgggtac ttatgaatgt ggcaatgaga caagaaccat tcgagagtag
4381 gatccgtttg aggtttacca agtaccataa gatccttaaa tttttattat ctagctagat
4441 gataatatta tatcaagaat tgtacctgaa agcaaataaa ttttttatct ggcttaacta
4501 tgcggcatca gagcagattg tactgagagt gcaccatatg cggtgtgaaa taccgcacag
4561 atgcgtaagg agaaaatacc gcatcaggcg ctcttccgct tcctcgctca ctgactcgct
4621 gcgctcggtc gttcggctgc ggcgagcggt atcagctcac tcaaaggcgg taatacggtt
4681 atccacagaa tcaggggata acgcaggaaa gaacatgtga gcaaaaggcc agcaaaaggc
4741 caggaaccgt aaaaaggccg cgttgctggc gtttttccat aggctccgcc cccctgacga
4801 gcatcacaaa aatcgacgct caagtcagag gtggcgaaac ccgacaggac tataaagata
4861 ccaggcgttt ccccctggaa gctccctcgt gcgctctcct gttccgaccc tgccgcttac
4921 cggatacctg tccgcctttc tcccttcggg aagcgtggcg ctttctcata gctcacgctg
4981 taggtatctc agttcggtgt aggtcgttcg ctccaagctg ggctgtgtgc acgaaccccc
5041 cgttcagccc gaccgctgcg ccttatccgg taactatcgt cttgagtcca acccggtaag
5101 acacgactta tcgccactgg cagcagccac tggtaacagg attagcagag cgaggtatgt
5161 aggcggtgct acagagttct tgaagtggtg gcctaactac ggctacacta gaaggacagt
5221 atttggtatc tgcgctctgc tgaagccagt taccttcgga aaaagagttg gtagctcttg
5281 atccggcaaa caaaccaccg ctggtagcgg tggttttttt gtttgcaagc agcagattac
5341 gcgcagaaaa aaaggatctc aagaagatcc tttgatcttt tctacggggt ctgacgctca
5401 gtggaacgaa aactcacgtt aagggatttt ggtcatgagg ggtaataact gatataatta
5461 aattgaagct ctaatttgtg agtttagtat acatgcattt acttataata cagtttttta
5521 gttttgctgg ccgcatcttc tcaaatatgc ttcccagcct gcttttctgt aacgttcacc
5581 ctctacctta gcatcccttc cctttgcaaa tagtcctctt ccaacaataa taatgtcaga
5641 tcctgtagag accacatcat ccacggttct atactgttga cccaatgcgt ctcccttgtc
5701 atctaaaccc acaccgggtg tcataatcaa ccaatcgtaa ccttcatctc ttccacccat
5761 gtctctttga gcaataaagc cgataacaaa atctttgtcg ctcttcgcaa tgtcaacagt
5821 acccttagta tattctccag tagataggga gcccttgcat gacaattctg ctaacatcaa
5881 aaggcctcta ggttcctttg ttacttcttc tgccgcctgc ttcaaaccgc taacaatacc
5941 tgggcccacc acaccgtgtg cattcgtaat gtctgcccat tctgctattc tgtatacacc
6001 cgcagagtac tgcaatttga ctgtattacc aatgtcagca aattttctgt cttcgaagag
6061 taaaaaattg tacttggcgg ataatgcctt tagcggctta actgtgccct ccatggaaaa
6121 atcagtcaaa atatccacat gtgtttttag taaacaaatt ttgggaccta atgcttcaac
6181 taactccagt aattccttgg tggtacgaac atccaatgaa gcacacaagt ttgtttgctt
6241 ttcgtgcatg atattaaata gcttggcagc aacaggacta ggatgagtag cagcacgttc
6301 cttatatgta gctttcgaca tgatttatct tcgtttcctg caggtttttg ttctgtgcag
6361 ttgggttaag aatactgggc aatttcatgt ttcttcaaca ctacatatgc gtatatatac
6421 caatctaagt ctgtgctcct tccttcgttc ttccttctgt tcggagatta ccgaatcaaa
6481 aaaatttcaa agaaaccgaa atcaaaaaaa agaataaaaa aaaaatgatg aattgaattg
6541 aaaagctagc ttatcgatga taagctgtca aagatgagaa ttaattccac ggactataga
6601 ctatactaga tactccgtct actgtacgat acacttccgc tcaggtcctt gtcctttaac
6661 gaggccttac cactcttttg ttactctatt gatccagctc agcaaaggca gtgtgatcta
6721 agattctatc ttcgcgatgt agtaaaacta gctagaccga gaaagagact agaaatgcaa
6781 aaggcacttc tacaatggct gccatcatta ttatccgatg tgacgctgca gcttctcaat
6841 gatattcgaa tacgctttga ggagatacag cctaatatcc gacaaactgt tttacagatt
6901 tacgatcgta cttgttaccc atcattgaat tttgaacatc cgaacctggg agttttccct
6961 gaaacagata gtatatttga acctgtataa taatatatag tctagcgctt tacggaagac
7021 aatgtatgta tttcggttcc tggagaaact attgcatcta ttgcataggt aatcttgcac
7081 gtcgcatccc cggttcattt tctgcgtttc catcttgcac ttcaatagca tatctttgtt
7141 aacgaagcat ctgtgcttca ttttgtagaa caaaaatgca acgcgagagc gctaattttt
7201 caaacaaaga atctgagctg catttttaca gaacagaaat gcaacgcgaa agcgctattt
7261 taccaacgaa gaatctgtgc ttcatttttg taaaacaaaa atgcaacgcg acgagagcgc
7321 taatttttca aacaaagaat ctgagctgca tttttacaga acagaaatgc aacgcgagag
7381 cgctatttta ccaacaaaga atctatactt cttttttgtt ctacaaaaat gcatcccgag
7441 agcgctattt ttctaacaaa gcatcttaga ttactttttt tctcctttgt gcgctctata
7501 atgcagtctc ttgataactt tttgcactgt aggtccgtta aggttagaag aaggctactt
7561 tggtgtctat tttctcttcc ataaaaaaag cctgactcca cttcccgcgt ttactgatta
7621 ctagcgaagc tgcgggtgca ttttttcaag ataaaggcat ccccgattat attctatacc
7681 gatgtggatt gcgcatactt tgtgaacaga aagtgatagc gttgatgatt cttcattggt
7741 cagaaaatta tgaacggttt cttctatttt gtctctatat actacgtata ggaaatgttt
7801 acattttcgt attgttttcg attcactcta tgaatagttc ttactacaat ttttttgtct
7861 aaagagtaat actagagata aacataaaaa atgtagaggt cgagtttaga tgcaagttca
7921 aggagcgaaa ggtggatggg taggttatat agggatatag cacagagata tatagcaaag
7981 agatactttt gagcaatgtt tgtggaagcg gtattcgcaa tgggaagctc caccccggtt
8041 gataatcaga aaagccccaa aaacaggaag attattatca aaaaggatct tcacctagat
8101 ccttttaaat taaaaatgaa gttttaaatc aatctaaagt atatatgagt aaacttggtc
8161 tgacagttac caatgcttaa tcagtgaggc acctatctca gcgatctgtc tatttcgttc
8221 atccatagtt gcctgactcc ccgtcgtgta gataactacg atacgggagc gcttaccatc
8281 tggccccagt gctgcaatga taccgcgaga cccacgctca ccggctccag atttatcagc
8341 aataaaccag ccagccggaa gggccgagcg cagaagtggt cctgcaactt tatccgcctc
8401 catccagtct attaattgtt gccgggaagc tagagtaagt agttcgccag ttaatagttt
8461 gcgcaacgtt gttggcattg ctacaggcat cgtggtgtca ctctcgtcgt ttggtatggc
8521 ttcattcagc tccggttccc aacgatcaag gcgagttaca tgatccccca tgttgtgcaa
8581 aaaagcggtt agctccttcg gtcctccgat cgttgtcaga agtaagttgg ccgcagtgtt
8641 atcactcatg gttatggcag cactgcataa ttctcttact gtcatgccat ccgtaagatg
8701 cttttctgtg actggtgagt actcaaccaa gtcattctga gaatagtgta tgcggcgacc
8761 gagttgctct tgcccggcgt caatacggga taatagtgta tcacatagca gaactttaaa
8821 agtgctcatc attggaaaac gttcttcggg gcgaaaactc tcaaggatct taccgctgtt
8881 gagatccagt tcgatgtaac ccactcgtgc acccaactga tcttcagcat cttttacttt
8941 caccagcgtt tctgggtgag caaaaacagg aaggcaaaat gccgcaaaaa agggaataag
9001 ggcgacacgg aaatgttgaa tactcatact cttccttttt caatattatt gaagcattta
9061 tcagggttat tgtctcatga gcggatacat atttgaatgt atttagaaaa ataaacaaat
9121 aggggttccg cgcacatttc cccgaaaagt gccacctgct aagaaaccat tattatcatg
9181 acattaacct ataaaaatag gcgtatcacg aggccctttc gtc
//