-
Notifications
You must be signed in to change notification settings - Fork 1
/
pYPKa_Z_TEF1.gb
132 lines (132 loc) · 7.48 KB
/
pYPKa_Z_TEF1.gb
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
LOCUS pYPKa_Z_TEF1 3720 bp DNA circular UNK 26-JUN-2017
DEFINITION cSEGUID_0s47KRvklrl6IzfaACskS5ZBWPM_2017-06-26T06:18:43.523491
ACCESSION id?
VERSION id?
KEYWORDS .
SOURCE .
ORGANISM .
.
FEATURES Location/Qualifiers
misc 531..556
/label="fw579"
primer_bind 537..556
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="<unknown name>"
misc 537..556
/label="<unknown id>"
primer_bind 537..556
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="fw579"
primer_bind complement(1089..1115)
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="<unknown name>"
misc complement(1089..1115)
/label="<unknown id>"
primer_bind complement(1089..1115)
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="rv579"
misc complement(1089..1122)
/label="rv579"
primer_bind complement(1150..1170)
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="567_pCAPsAjiIF"
misc complement(1150..1172)
/label="567_pCAPsAjiIF"
misc 1173..1194
/label="568_pCAPsAjiIR"
primer_bind 1175..1194
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="568_pCAPsAjiIR"
rep_origin 1905
/direction=BOTH
gene complement(2664..3524)
/gene="bla"
CDS complement(2664..3524)
/codon_start=1
/db_xref="GI:2769263"
/db_xref="GOA:Q79DR3"
/db_xref="HSSP:P62593"
/db_xref="InterPro:IPR000871"
/db_xref="InterPro:IPR001466"
/db_xref="InterPro:IPR012338"
/db_xref="UniProtKB/TrEMBL:Q79DR3"
/gene="bla"
/product="beta-lactamase"
/protein_id="CAA04868.1"
/transl_table=11
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
ORIGIN
1 tcgcgcgttt cggtgatgac ggtgaaaacc tctgacacat gcagctcccg gagacggtca
61 cagcttgtct gtaagcggat gccgggagca gacaagcccg tcagggcgcg tcagcgggtg
121 ttggcgggtg tcggggctgg cttaactatg cggcatcaga gcagattgta ctgagagtgc
181 accatagatc ctgaggatcg gggtgataaa tcagtctgcg ccacatcggg ggaaacaaaa
241 tggcgcgaga tctaaaaaaa aaggctccaa aaggagcctt tcgcgctacc aggtaacgcg
301 ccactccgac gggattaacg agtgccgtaa acgacgatgg ttttaccgtg tgcggagatc
361 aggttctgat cctcgagcat cttaagaatt cgtcccacgg tttgtctaga gcagccgaca
421 atctggccaa tttcctgacg ggtaattttg atttgcatgc cgtccgggtg agtcatagcg
481 tctggttgtt ttgccagatt cagcagagtc tgtgcaatgc ggccgctgac ttaaatacaa
541 tgcatacttt gtacgttcaa aatacaatgc agtagatata tttatgcata ttacatataa
601 tacatatcac ataggaagca acaggcgcgt tggactttta attttcgagg accgcgaatc
661 cttacatcac acccaatccc ccacaagtga tcccccacac accatagctt caaaatgttt
721 ctactccttt tttactcttc cagattttct cggactccgc gcatcgccgt accacttcaa
781 aacacccaag cacagcatac taaatttccc ctctttcttc ctctagggtg tcgttaatta
841 cccgtactaa aggtttggaa aagaaaaaag agaccgcctc gtttcttttt cttcgtcgaa
901 aaaggcaata aaaattttta tcacgtttct ttttcttgaa aatttttttt tttgattttt
961 ttctctttcg atgacctccc attgatattt aagttaataa acggtcttca atttctcaag
1021 tttcagtttc atttttcttg ttctattaca acttttttta cttcttgctc attagaaaga
1081 aagcatagca atctaatcta agttttaatt acaaattaat tagtcgagga acgccaggtt
1141 gcccactttc tcactagtga cctgcagccg acgtgccatc tgtgcagaca aacgcatcag
1201 gatatccgga tttacctgaa tcaattggcg aaattttttg tacgaaattt cagccacttc
1261 acaggcggtt ttcgcacgta cccatgcgct acgttcctgg ccctcttcaa acaggcccag
1321 ttcgccaata aaatcaccct gattcagata ggagaggatc atttctttac cctcttcgtc
1381 tttgatcagc actgccacag agcctttaac gatgtagtac agcgtttccg ctttttcacc
1441 ctggtgaata agcgtgctct tggatgggta cttatgaatg tggcaatgag acaagaacca
1501 ttcgagagta ggatccgttt gaggtttacc aagtaccata agatccttaa atttttatta
1561 tctagctaga tgataatatt atatcaagaa ttgtacctga aagcaaataa attttttatc
1621 tggcttaact atgcggcatc agagcagatt gtactgagag tgcaccatat gcggtgtgaa
1681 ataccgcaca gatgcgtaag gagaaaatac cgcatcaggc gctcttccgc ttcctcgctc
1741 actgactcgc tgcgctcggt cgttcggctg cggcgagcgg tatcagctca ctcaaaggcg
1801 gtaatacggt tatccacaga atcaggggat aacgcaggaa agaacatgtg agcaaaaggc
1861 cagcaaaagg ccaggaaccg taaaaaggcc gcgttgctgg cgtttttcca taggctccgc
1921 ccccctgacg agcatcacaa aaatcgacgc tcaagtcaga ggtggcgaaa cccgacagga
1981 ctataaagat accaggcgtt tccccctgga agctccctcg tgcgctctcc tgttccgacc
2041 ctgccgctta ccggatacct gtccgccttt ctcccttcgg gaagcgtggc gctttctcat
2101 agctcacgct gtaggtatct cagttcggtg taggtcgttc gctccaagct gggctgtgtg
2161 cacgaacccc ccgttcagcc cgaccgctgc gccttatccg gtaactatcg tcttgagtcc
2221 aacccggtaa gacacgactt atcgccactg gcagcagcca ctggtaacag gattagcaga
2281 gcgaggtatg taggcggtgc tacagagttc ttgaagtggt ggcctaacta cggctacact
2341 agaaggacag tatttggtat ctgcgctctg ctgaagccag ttaccttcgg aaaaagagtt
2401 ggtagctctt gatccggcaa acaaaccacc gctggtagcg gtggtttttt tgtttgcaag
2461 cagcagatta cgcgcagaaa aaaaggatct caagaagatc ctttgatctt ttctacgggg
2521 tctgacgctc agtggaacga aaactcacgt taagggattt tggtcatgag attatcaaaa
2581 aggatcttca cctagatcct tttaaattaa aaatgaagtt ttaaatcaat ctaaagtata
2641 tatgagtaaa cttggtctga cagttaccaa tgcttaatca gtgaggcacc tatctcagcg
2701 atctgtctat ttcgttcatc catagttgcc tgactccccg tcgtgtagat aactacgata
2761 cgggagggct taccatctgg ccccagtgct gcaatgatac cgcgagaccc acgctcaccg
2821 gctccagatt tatcagcaat aaaccagcca gccggaaggg ccgagcgcag aagtggtcct
2881 gcaactttat ccgcctccat ccagtctatt aattgttgcc gggaagctag agtaagtagt
2941 tcgccagtta atagtttgcg caacgttgtt gccattgcta caggcatcgt ggtgtcacgc
3001 tcgtcgtttg gtatggcttc attcagctcc ggttcccaac gatcaaggcg agttacatga
3061 tcccccatgt tgtgcaaaaa agcggttagc tccttcggtc ctccgatcgt tgtcagaagt
3121 aagttggccg cagtgttatc actcatggtt atggcagcac tgcataattc tcttactgtc
3181 atgccatccg taagatgctt ttctgtgact ggtgagtact caaccaagtc attctgagaa
3241 tagtgtatgc ggcgaccgag ttgctcttgc ccggcgtcaa tacgggataa taccgcgcca
3301 catagcagaa ctttaaaagt gctcatcatt ggaaaacgtt cttcggggcg aaaactctca
3361 aggatcttac cgctgttgag atccagttcg atgtaaccca ctcgtgcacc caactgatct
3421 tcagcatctt ttactttcac cagcgtttct gggtgagcaa aaacaggaag gcaaaatgcc
3481 gcaaaaaagg gaataagggc gacacggaaa tgttgaatac tcatactctt cctttttcaa
3541 tattattgaa gcatttatca gggttattgt ctcatgagcg gatacatatt tgaatgtatt
3601 tagaaaaata aacaaatagg ggttccgcgc acatttcccc gaaaagtgcc acctgctaag
3661 aaaccattat tatcatgaca ttaacctata aaaataggcg tatcacgagg ccctttcgtc
//