-
Notifications
You must be signed in to change notification settings - Fork 1
/
pYPKa_Z_FBA1.gb
133 lines (133 loc) · 7.54 KB
/
pYPKa_Z_FBA1.gb
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
LOCUS pYPKa_Z_FBA1 3771 bp DNA circular UNK 26-JUN-2017
DEFINITION cSEGUID_OW6W-5Q416AVU9FTAV_I20RdAdU_2017-06-26T06:18:19.536313
ACCESSION id?
VERSION id?
KEYWORDS .
SOURCE .
ORGANISM .
.
FEATURES Location/Qualifiers
misc 531..564
/label="fw630"
primer_bind 537..564
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="<unknown name>"
misc 537..564
/label="<unknown id>"
primer_bind 537..564
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="fw630"
primer_bind complement(1142..1166)
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="<unknown name>"
misc complement(1142..1166)
/label="<unknown id>"
primer_bind complement(1142..1166)
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="rv630"
misc complement(1142..1173)
/label="rv630"
primer_bind complement(1201..1221)
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="567_pCAPsAjiIF"
misc complement(1201..1223)
/label="567_pCAPsAjiIF"
misc 1224..1245
/label="568_pCAPsAjiIR"
primer_bind 1226..1245
/ApEinfo_fwdcolor="green"
/ApEinfo_revcolor="red"
/note="568_pCAPsAjiIR"
rep_origin 1956
/direction=BOTH
gene complement(2715..3575)
/gene="bla"
CDS complement(2715..3575)
/codon_start=1
/db_xref="GI:2769263"
/db_xref="GOA:Q79DR3"
/db_xref="HSSP:P62593"
/db_xref="InterPro:IPR000871"
/db_xref="InterPro:IPR001466"
/db_xref="InterPro:IPR012338"
/db_xref="UniProtKB/TrEMBL:Q79DR3"
/gene="bla"
/product="beta-lactamase"
/protein_id="CAA04868.1"
/transl_table=11
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
ORIGIN
1 tcgcgcgttt cggtgatgac ggtgaaaacc tctgacacat gcagctcccg gagacggtca
61 cagcttgtct gtaagcggat gccgggagca gacaagcccg tcagggcgcg tcagcgggtg
121 ttggcgggtg tcggggctgg cttaactatg cggcatcaga gcagattgta ctgagagtgc
181 accatagatc ctgaggatcg gggtgataaa tcagtctgcg ccacatcggg ggaaacaaaa
241 tggcgcgaga tctaaaaaaa aaggctccaa aaggagcctt tcgcgctacc aggtaacgcg
301 ccactccgac gggattaacg agtgccgtaa acgacgatgg ttttaccgtg tgcggagatc
361 aggttctgat cctcgagcat cttaagaatt cgtcccacgg tttgtctaga gcagccgaca
421 atctggccaa tttcctgacg ggtaattttg atttgcatgc cgtccgggtg agtcatagcg
481 tctggttgtt ttgccagatt cagcagagtc tgtgcaatgc ggccgctgac ttaaatataa
541 caatactgac agtactaaat aattgcctac ttggcttcac atacgttgca tacgtcgata
601 tagataataa tgataatgac agcaggatta tcgtaatacg taatagttga aaatctcaaa
661 aatgtgtggg tcattacgta aataatgata ggaatgggat tcttctattt ttcctttttc
721 cattctagca gccgtcggga aaacgtggca tcctctcttt cgggctcaat tggagtcacg
781 ctgccgtgag catcctctct ttccatatct aacaactgag cacgtaacca atggaaaagc
841 atgagcttag cgttgctcca aaaaagtatt ggatggttaa taccatttgt ctgttctctt
901 ctgactttga ctcctcaaaa aaaaaaaatc tacaatcaac agatcgcttc aattacgccc
961 tcacaaaaac ttttttcctt cttcttcgcc cacgttaaat tttatccctc atgttgtcta
1021 acggatttct gcacttgatt tattataaaa agacaaagac ataatacttc tctatcaatt
1081 tcagttattg ttcttccttg cgttattctt ctgttcttct ttttcttttg tcatatataa
1141 ccataaccaa gtaatacata ttcaaattaa ttagtcgagg aacgccaggt tgcccacttt
1201 ctcactagtg acctgcagcc gacgtgccat ctgtgcagac aaacgcatca ggatatccgg
1261 atttacctga atcaattggc gaaatttttt gtacgaaatt tcagccactt cacaggcggt
1321 tttcgcacgt acccatgcgc tacgttcctg gccctcttca aacaggccca gttcgccaat
1381 aaaatcaccc tgattcagat aggagaggat catttcttta ccctcttcgt ctttgatcag
1441 cactgccaca gagcctttaa cgatgtagta cagcgtttcc gctttttcac cctggtgaat
1501 aagcgtgctc ttggatgggt acttatgaat gtggcaatga gacaagaacc attcgagagt
1561 aggatccgtt tgaggtttac caagtaccat aagatcctta aatttttatt atctagctag
1621 atgataatat tatatcaaga attgtacctg aaagcaaata aattttttat ctggcttaac
1681 tatgcggcat cagagcagat tgtactgaga gtgcaccata tgcggtgtga aataccgcac
1741 agatgcgtaa ggagaaaata ccgcatcagg cgctcttccg cttcctcgct cactgactcg
1801 ctgcgctcgg tcgttcggct gcggcgagcg gtatcagctc actcaaaggc ggtaatacgg
1861 ttatccacag aatcagggga taacgcagga aagaacatgt gagcaaaagg ccagcaaaag
1921 gccaggaacc gtaaaaaggc cgcgttgctg gcgtttttcc ataggctccg cccccctgac
1981 gagcatcaca aaaatcgacg ctcaagtcag aggtggcgaa acccgacagg actataaaga
2041 taccaggcgt ttccccctgg aagctccctc gtgcgctctc ctgttccgac cctgccgctt
2101 accggatacc tgtccgcctt tctcccttcg ggaagcgtgg cgctttctca tagctcacgc
2161 tgtaggtatc tcagttcggt gtaggtcgtt cgctccaagc tgggctgtgt gcacgaaccc
2221 cccgttcagc ccgaccgctg cgccttatcc ggtaactatc gtcttgagtc caacccggta
2281 agacacgact tatcgccact ggcagcagcc actggtaaca ggattagcag agcgaggtat
2341 gtaggcggtg ctacagagtt cttgaagtgg tggcctaact acggctacac tagaaggaca
2401 gtatttggta tctgcgctct gctgaagcca gttaccttcg gaaaaagagt tggtagctct
2461 tgatccggca aacaaaccac cgctggtagc ggtggttttt ttgtttgcaa gcagcagatt
2521 acgcgcagaa aaaaaggatc tcaagaagat cctttgatct tttctacggg gtctgacgct
2581 cagtggaacg aaaactcacg ttaagggatt ttggtcatga gattatcaaa aaggatcttc
2641 acctagatcc ttttaaatta aaaatgaagt tttaaatcaa tctaaagtat atatgagtaa
2701 acttggtctg acagttacca atgcttaatc agtgaggcac ctatctcagc gatctgtcta
2761 tttcgttcat ccatagttgc ctgactcccc gtcgtgtaga taactacgat acgggagggc
2821 ttaccatctg gccccagtgc tgcaatgata ccgcgagacc cacgctcacc ggctccagat
2881 ttatcagcaa taaaccagcc agccggaagg gccgagcgca gaagtggtcc tgcaacttta
2941 tccgcctcca tccagtctat taattgttgc cgggaagcta gagtaagtag ttcgccagtt
3001 aatagtttgc gcaacgttgt tgccattgct acaggcatcg tggtgtcacg ctcgtcgttt
3061 ggtatggctt cattcagctc cggttcccaa cgatcaaggc gagttacatg atcccccatg
3121 ttgtgcaaaa aagcggttag ctccttcggt cctccgatcg ttgtcagaag taagttggcc
3181 gcagtgttat cactcatggt tatggcagca ctgcataatt ctcttactgt catgccatcc
3241 gtaagatgct tttctgtgac tggtgagtac tcaaccaagt cattctgaga atagtgtatg
3301 cggcgaccga gttgctcttg cccggcgtca atacgggata ataccgcgcc acatagcaga
3361 actttaaaag tgctcatcat tggaaaacgt tcttcggggc gaaaactctc aaggatctta
3421 ccgctgttga gatccagttc gatgtaaccc actcgtgcac ccaactgatc ttcagcatct
3481 tttactttca ccagcgtttc tgggtgagca aaaacaggaa ggcaaaatgc cgcaaaaaag
3541 ggaataaggg cgacacggaa atgttgaata ctcatactct tcctttttca atattattga
3601 agcatttatc agggttattg tctcatgagc ggatacatat ttgaatgtat ttagaaaaat
3661 aaacaaatag gggttccgcg cacatttccc cgaaaagtgc cacctgctaa gaaaccatta
3721 ttatcatgac attaacctat aaaaataggc gtatcacgag gccctttcgt c
//