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nrnconf.h
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nrnconf.h
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/*
Copyright (c) 2016, Blue Brain Project
All rights reserved.
Redistribution and use in source and binary forms, with or without modification,
are permitted provided that the following conditions are met:
1. Redistributions of source code must retain the above copyright notice,
this list of conditions and the following disclaimer.
2. Redistributions in binary form must reproduce the above copyright notice,
this list of conditions and the following disclaimer in the documentation
and/or other materials provided with the distribution.
3. Neither the name of the copyright holder nor the names of its contributors
may be used to endorse or promote products derived from this software
without specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE
LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF
THE POSSIBILITY OF SUCH DAMAGE.
*/
#ifndef _H_NRNCONF_
#define _H_NRNCONF_
#include <stdio.h>
#include <math.h>
#include <assert.h>
#include <errno.h>
#include <stdint.h>
namespace coreneuron {
#define NRNBBCORE 1
#define nil NULL
#define Sprintf sprintf
typedef int Datum;
//#define Datum int
typedef int (*Pfri)();
typedef char Symbol;
#define CACHEVEC 2
#define VEC_A(i) (_nt->_actual_a[(i)])
#define VEC_B(i) (_nt->_actual_b[(i)])
#define VEC_D(i) (_nt->_actual_d[(i)])
#define VEC_RHS(i) (_nt->_actual_rhs[(i)])
#define VEC_V(i) (_nt->_actual_v[(i)])
#define VEC_AREA(i) (_nt->_actual_area[(i)])
#define VECTORIZE 1
extern double celsius;
extern double t, dt;
extern int rev_dt;
extern int secondorder;
extern int stoprun;
extern const char* bbcore_write_version;
#define tstopbit (1 << 15)
#define tstopset stoprun |= tstopbit
#define tstopunset stoprun &= (~tstopbit)
extern void hoc_execerror(const char*, const char*); /* print and abort */
extern void hoc_warning(const char*, const char*);
extern void* nrn_cacheline_alloc(void** memptr, size_t size);
extern double* makevector(size_t size); /* size in bytes */
extern double** makematrix(size_t nrow, size_t ncol);
void freevector(double*);
void freematrix(double**);
extern void* emalloc(size_t size);
extern void* ecalloc(size_t n, size_t size);
extern void* erealloc(void* ptr, size_t size);
extern void* emalloc_align(size_t size, size_t alignment);
extern void* ecalloc_align(size_t n, size_t alignment, size_t size);
extern double hoc_Exp(double x);
extern void check_bbcore_write_version(const char*);
/* will go away at some point */
typedef struct Point_process {
int _i_instance;
short _type;
short _tid; /* NrnThread id */
} Point_process;
extern char* pnt_name(Point_process* pnt);
} // namespace coreneuron
#endif