Dockerfile.ubuntu1604openmpi3

FROM ubuntu1604

RUN    apt-get update 

# OS packages needed to build OpenMPI.
RUN apt-get install -y \
    file \
    flex \
    g++ \
    gcc \
    gfortran \
    less \
    libdb5.3-dev \
    make \
    wget

# InfiniBand stack based on https://community.mellanox.com/docs/DOC-2431
# note that this is probably not minimal install as it also installs kernel
# modules which the container will not use
RUN apt-get install -y dkms infiniband-diags libibverbs* ibacm librdmacm* libmlx4* libmlx5* mstflint libibcm.* libibmad.* libibumad* opensm srptools libmlx4-dev librdmacm-dev rdmacm-utils ibverbs-utils perftest vlan ibutils libnl-3-200 libnl-route-3-200 libnl-route-3-dev libnl-utils 

RUN apt-get install -y libtool autoconf automake build-essential ibutils ibverbs-utils rdmacm-utils infiniband-diags perftest librdmacm-dev libibverbs-dev libmlx4-1 numactl libnuma-dev git libtool pkg-config libpciaccess0

# Compile OpenMPI. We can't use the Debian package because
# --disable-pty-support is needed to avoid "pipe function call failed when
# setting up I/O forwarding subsystem".
ENV MPI_URL https://www.open-mpi.org/software/ompi/v3.0/downloads
ENV MPI_VERSION 3.0.0
WORKDIR /usr/src
RUN wget -nv ${MPI_URL}/openmpi-${MPI_VERSION}.tar.gz
RUN tar xf openmpi-${MPI_VERSION}.tar.gz
RUN    cd openmpi-${MPI_VERSION} \
    && CFLAGS=-O3 \
       CXXFLAGS=-O3 \
       ./configure --prefix=/usr \
                   --sysconfdir=/mnt/0 \
                   --disable-pty-support \
    && make -j$(getconf _NPROCESSORS_ONLN) install
RUN rm -Rf openmpi-${MPI_VERSION}*

# OS packages for CHPC's compatibility (LMod, etc)
RUN mkdir /uufs /scratch
RUN apt-get install -y \
    lsb-release \ 
    liblua5.1-0 liblua5.1-0-dev lua-filesystem-dev lua-filesystem lua-posix-dev lua-posix lua5.1 tcl tcl-dev lua-term lua-term-dev lua-json  
#COPY /home/u0101881/charliecloud/containers/ubuntu1604openmpi2/91-chpc.sh /etc/profile.d/
COPY 91-chpc.sh /etc/profile.d/
RUN echo ". /etc/profile.d/91-chpc.sh" >> /etc/bash.bashrc
RUN echo "export CHARLIECLOUD_CONTAINER=1" >> /etc/bash.bashrc
ENV CHARLIECLOUD_CONTAINER 1