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I'm currently running some tests with LRA+CuteSV, and I'm looking for 1-2 known translocations, but LRA+CuteSV isn't able to find it. I was wondering if either of you had thoughts on how to get LRA+CuteSV to call more translocations.
The text was updated successfully, but these errors were encountered:
Are you using public data? If possible, could you provide the data link and the locations of the translocations you are looking at? I can check if lra misses the translocations and which parameters can improve that.
Hi @mchaisso and @Jingwen7 ,
I'm currently running some tests with LRA+CuteSV, and I'm looking for 1-2 known translocations, but LRA+CuteSV isn't able to find it. I was wondering if either of you had thoughts on how to get LRA+CuteSV to call more translocations.
The text was updated successfully, but these errors were encountered: