Plot cylinders in mayavi #147
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Change import that caused Sphinx to put out warnings `from numpy.linalg import norm` adds norm to the namespace, while `import numpy as np` and the using `np.linalg.norm()` in the code will not.
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This can be used to mark e.g. the optical axis in a plot or for obscuring support struts (not part of this PR). Includes a few small bug fixes that I discovered while getting this to work. See commit messages for details.