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Clinical-Genomics · Feb 24, 2021 · d1aa250 · d1aa250
1 parent bd09a32
commit d1aa250
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Showing 3 changed files with 5 additions and 4 deletions.
diff --git a/NIPTool/build/document.py b/NIPTool/build/document.py
@@ -1,5 +1,4 @@
 from NIPTool.models.constants import SAMPLE_KEYS, BATCH_KEYS
-from typing import Optional
 
 
 def build_document(csv_data: dict, document_keys: list) -> dict:

diff --git a/NIPTool/server/templates/batch/header.html b/NIPTool/server/templates/batch/header.html
@@ -30,7 +30,7 @@
                             Result file</a>
                         <li class="divider"></li>
                         <a class="dropdown-item"
-                           href="{{ url_for('server.download', file_id='segmental_calls', batch_id=batch._id) }}">segmental
+                           href="{{ url_for('server.download', file_id='segmental_calls', batch_id=batch._id) }}">Segmental
                             calls</a>
                     </ul>
                 </li>

diff --git a/NIPTool/server/templates/batch/tabs/table.html b/NIPTool/server/templates/batch/tabs/table.html
@@ -41,6 +41,7 @@
                                             <th>FFX(%)</th>
                                             <th>FFY(%)</th>
                                             <th>CNVSegment</th>
+                                            <th>Download</th>
                                             <th><a href="#" data-toggle="tooltip" data-placement="bottom" title="Warning for chomosome abnormality. Automatically generated. Based on pre defined NCV trsholds">Warning</a></th>
                                             <th><a href="#" data-toggle="tooltip" data-placement="bottom" title="Chomosome abnormalies. Manually classified by user through the sample page">Status</a></th>
                                             <th><a href="#" data-toggle="tooltip" data-placement="bottom" title="Samples checked in the 'Include' column are added to the validation sample set for comparison. Check the checkboxes for samples to include and save. If all samples are ok, just press 'set all OK'.">Include</a></th>
@@ -61,8 +62,9 @@
                                             <td width="4%" class = "{{sample.FFX.warn}}">{{sample.FFX.value}}</td>
                                             <td width="4%" class = "{{sample.FFY.warn}}">{{sample.FFY.value}}</td>
                                             <td width="4%" class = "{{sample.CNVSegment.warn}}">{{sample.CNVSegment.value}}</td>
-                                            <th><p> <small></small></p></th>
-                                            <th><p> <small>{{ sample.Status }}</small></p></th>
+                                            <td><a class="dropdown-item" href="{{ url_for('server.download', file_id='segmental_calls', batch_id=batch._id) }}">segmental calls</a></td>
+                                            <td><p> <small></small></p></td>
+                                            <td><p> <small>{{ sample.Status }}</small></p></td>
                                             {% if current_user.role=='RW' %}
 
                                             <td width="1%" {% if sample.Include %}class="success"{% endif %}> <input type="checkbox" name="include_{{ sample.sample_id }}" {% if sample.Include %}checked{% endif %}></td>