/
minuit.py
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/
minuit.py
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# cspell: ignore nfcn
"""Minuit2 adapter to the `iminuit.Minuit` package."""
from __future__ import annotations
import logging
import time
from typing import Any, Callable, Iterable, Mapping
import iminuit
from tqdm.auto import tqdm
from tensorwaves.interface import Estimator, FitResult, Optimizer, ParameterValue
from ._parameter import ParameterFlattener
from .callbacks import Callback, _create_log # pyright: ignore[reportPrivateUsage]
_LOGGER = logging.getLogger(__name__)
class Minuit2(Optimizer):
"""Adapter to `Minuit2 <https://root.cern.ch/root/htmldoc/guides/minuit2/Minuit2.html>`_.
Implements the `~.interface.Optimizer` interface using `iminuit.Minuit`.
Args:
callback: Optionally insert behavior through :mod:`.callbacks` into the
:meth:`optimize` method.
use_analytic_gradient: Use the :meth:`.Estimator.gradient` when calling
:meth:`optimize`.
minuit_modifier: Modify the internal `iminuit.Minuit` optimizer that is
constructed during the :meth:`optimize` call. See
:ref:`usage/basics:Minuit2` for an example.
migrad_args: Keyword arguments given to :meth:`iminuit.Minuit.migrad`.
"""
def __init__(
self,
callback: Callback | None = None,
use_analytic_gradient: bool = False,
minuit_modifier: Callable[[iminuit.Minuit], None] | None = None,
migrad_args: dict[str, Any] | None = None,
) -> None:
self.__callback = callback
self.__use_gradient = use_analytic_gradient
if minuit_modifier is not None and not callable(minuit_modifier):
msg = (
"minuit_modifier has to be a callable that takes a"
f" {iminuit.Minuit.__module__}.{iminuit.Minuit.__name__} instance. See"
" constructor signature."
)
raise TypeError(msg)
self.__minuit_modifier = minuit_modifier
self.__migrad_args = {} if migrad_args is None else migrad_args
def optimize(
self,
estimator: Estimator,
initial_parameters: Mapping[str, ParameterValue],
) -> FitResult:
parameter_handler = ParameterFlattener(initial_parameters)
flattened_parameters = parameter_handler.flatten(initial_parameters)
progress_bar = tqdm(disable=_LOGGER.level > logging.WARNING)
n_function_calls = 0
parameters = parameter_handler.unflatten(flattened_parameters)
if self.__callback is not None:
self.__callback.on_optimize_start(
logs=_create_log(
optimizer=type(self),
estimator_type=type(estimator),
estimator_value=estimator(parameters),
function_call=n_function_calls,
parameters=parameters,
)
)
def update_parameters(pars: list) -> None:
for i, k in enumerate(flattened_parameters):
flattened_parameters[k] = pars[i]
def wrapped_function(pars: list) -> float:
nonlocal n_function_calls
n_function_calls += 1
update_parameters(pars)
parameters = parameter_handler.unflatten(flattened_parameters)
estimator_value = float(estimator(parameters))
progress_bar.set_postfix({"estimator": estimator_value})
progress_bar.update()
if self.__callback is not None:
self.__callback.on_function_call_end(
n_function_calls,
logs=_create_log(
optimizer=type(self),
estimator_type=type(estimator),
estimator_value=estimator_value,
function_call=n_function_calls,
parameters=parameters,
),
)
return estimator_value
def wrapped_gradient(pars: list) -> Iterable[float]:
update_parameters(pars)
parameters = parameter_handler.unflatten(flattened_parameters)
grad = estimator.gradient(parameters)
return parameter_handler.flatten(grad).values()
minuit = iminuit.Minuit(
wrapped_function,
tuple(flattened_parameters.values()),
grad=wrapped_gradient if self.__use_gradient else None,
name=tuple(flattened_parameters),
)
minuit.errors = tuple(
0.1 * abs(x) if abs(x) != 0.0 else 0.1
for x in flattened_parameters.values()
)
minuit.errordef = (
iminuit.Minuit.LIKELIHOOD
) # that error definition should be defined in the estimator
if self.__minuit_modifier is not None:
self.__minuit_modifier(minuit)
start_time = time.time()
minuit.migrad(**self.__migrad_args)
end_time = time.time()
parameter_values = {}
parameter_errors = {}
for i, name in enumerate(flattened_parameters):
par_state = minuit.params[i]
parameter_values[name] = par_state.value
parameter_errors[name] = par_state.error
assert minuit.fmin is not None # noqa: S101
fit_result = FitResult(
minimum_valid=minuit.valid,
execution_time=end_time - start_time,
function_calls=minuit.fmin.nfcn,
estimator_value=minuit.fmin.fval,
parameter_values=parameter_handler.unflatten(parameter_values),
parameter_errors=parameter_handler.unflatten(parameter_errors),
specifics=minuit,
)
if self.__callback is not None:
self.__callback.on_optimize_end(
logs=_create_log(
optimizer=type(self),
estimator_type=type(estimator),
estimator_value=fit_result.estimator_value,
function_call=fit_result.function_calls,
parameters=fit_result.parameter_values,
)
)
return fit_result