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Add TODO
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ddomingof committed Apr 30, 2019
1 parent 75e6c28 commit b9fea85
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1 change: 1 addition & 0 deletions src/pathme/cli.py
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Expand Up @@ -396,6 +396,7 @@ def universe(kegg_path, reactome_path, wikipathways_path, output, no_flatten, no
remove_isolated_list_abundances(universe_graph)

if flatten:
# TODO: Remove node list solo de Reactome
click.echo(f'Number of isolates after flattening: {nx.number_of_isolates(universe_graph)}')

click.echo("Merging variants and genes")
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