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add wp bel types to constants
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Sarah Mubeen committed Oct 9, 2018
1 parent a536cee commit e1a2ca5
Showing 1 changed file with 21 additions and 0 deletions.
21 changes: 21 additions & 0 deletions src/pathme/constants.py
Original file line number Diff line number Diff line change
Expand Up @@ -137,3 +137,24 @@ def ensure_pathme_folders():
'state change': 'XML State Change Relations',
'brite': 'XML Brite Hierarchy'
}

WIKIPATHWAYS_STATS_COLUMN_NAMES = {
'nodes': 'BEL Nodes',
'edges': 'BEL Edges',
'Protein': 'BEL Proteins',
'Gene': 'BEL Genes',
'Composite': 'BEL Composites',
'RNA': 'BEL RNA Entities',
'Complex': 'BEL Complexes',
'Abundance': 'BEL Compounds',
'BiologicalProcess': 'BEL Biological Processes',
'Reaction': 'BEL Reactions',
'increases': 'BEL Increase Relations',
'decreases': 'BEL Decrease Relations',
'association': 'BEL Association Relations',
'hasComponent': 'BEL Component Edges',
'hasVariant': 'BEL Variant Edges',
'hasReactant': 'BEL Reactants Edges',
'hasProduct': 'BEL Products Edges',
'translatedTo': 'BEL Translation Edges'
}

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