Encoder.py

import numpy as np
import torch
import torch.nn as nn
import torch.nn.functional as F
import math, copy, time
from torch.autograd import Variable



####
devices = torch.device('cuda:0')
####

def clones(module, N):
    "Produce N identical layers."
    return nn.ModuleList([copy.deepcopy(module) for _ in range(N)])


class LayerNorm(nn.Module):
    "Construct a layernorm module."
    def __init__(self, features, eps=1e-6):
        super(LayerNorm, self).__init__()
        self.a_2 = nn.Parameter(torch.ones(features))
        self.b_2 = nn.Parameter(torch.zeros(features))
        self.eps = eps

    def forward(self, x):
        mean = x.mean(-1, keepdim=True)
        std = x.std(-1, keepdim=True)
        return self.a_2 * (x - mean) / (std + self.eps) + self.b_2



class PositionalEncoding(nn.Module):
    "Implement the PE function."
    def __init__(self, d_model, dropout, max_len=5000):
        super(PositionalEncoding, self).__init__()
        self.dropout = nn.Dropout(p=dropout)
        
        # Compute the positional encodings once in log space.
        pe = torch.zeros(max_len, d_model)
        position = torch.arange(0., max_len).unsqueeze(1)
        div_term = torch.exp(torch.arange(0., d_model, 2) *
                             -(math.log(10000.0) / d_model))
        pe[:, 0::2] = torch.sin(position * div_term)
        pe[:, 1::2] = torch.cos(position * div_term)
        pe = pe.unsqueeze(0)
        self.register_buffer('pe', pe)
        
    def forward(self, x):
        x = x + Variable(self.pe[:, :x.size(1)], 
                         requires_grad=False)
        return self.dropout(x)

class Embeddings(nn.Module):
    def __init__(self, d_model, vocab, emb_dim, emb=None):
        super(Embeddings, self).__init__()
        self.lut = nn.Linear(1, d_model)
        self.d_model = d_model

    def forward(self, x):
        x = self.lut(x)
        return x


def attention(query, key, value, mask, dropout=None):
    "Compute 'Scaled Dot Product Attention'"
    # query: nbatches, self.h, l, self.d_k

    d_k = query.size(-1)
    scores = torch.matmul(query, key.transpose(-2, -1)) \
             / math.sqrt(d_k)
    if mask is not None:
        scores = scores.masked_fill(mask==0, -1e9)
    p_attn = F.softmax(scores, dim = -1)
    if dropout is not None:
        p_attn = dropout(p_attn)
    return torch.matmul(p_attn, value), p_attn


class MultiHeadedAttention(nn.Module):
    def __init__(self, h, d_model, dropout=0.1):
        "Take in model size and number of heads."
        super(MultiHeadedAttention, self).__init__()
        assert d_model % h == 0
        # We assume d_v always equals d_k
        self.d_k = d_model // h
        self.h = h
        self.linears = clones(nn.Linear(d_model, d_model), 4)
        self.attn = None
        self.dropout = nn.Dropout(p=dropout)
        
    def forward(self, query, key, value, mask):
        "Implements Figure 2"

        if mask is not None:
            mask = mask.unsqueeze(1)
        nbatches = query.size(0)
        
        # 1) Do all the linear projections in batch from d_model => h x d_k 
        query, key, value = \
            [l(x).view(nbatches, -1, self.h, self.d_k).transpose(1, 2)
             for l, x in zip(self.linears, (query, key, value))]
        
        # 2) Apply attention on all the projected vectors in batch. 
        x, self.attn = attention(query, key, value,
                                 mask=mask, dropout=self.dropout)
        #print (self.attn[0,0,:,:])
        
        # 3) "Concat" using a view and apply a final linear. 
        x = x.transpose(1, 2).contiguous() \
             .view(nbatches, -1, self.h * self.d_k)
        return self.linears[-1](x)


class PositionwiseFeedForward(nn.Module):
    "Implements FFN equation."
    def __init__(self, d_model, d_ff, dropout=0.1):
        super(PositionwiseFeedForward, self).__init__()
        self.w_1 = nn.Linear(d_model, d_ff)
        self.w_2 = nn.Linear(d_ff, d_model)
        self.dropout = nn.Dropout(dropout)

    def forward(self, x):
        return self.w_2(self.dropout(F.relu(self.w_1(x))))



class SublayerConnection(nn.Module):
    """
    A residual connection followed by a layer norm.
    Note for code simplicity the norm is first as opposed to last.
    """
    def __init__(self, size, dropout):
        super(SublayerConnection, self).__init__()
        self.norm = LayerNorm(size)
        self.dropout = nn.Dropout(dropout)

    def forward(self, x, sublayer):
        "Apply residual connection to any sublayer with the same size."
        return x + self.dropout(sublayer(self.norm(x)))


class EncoderLayer(nn.Module):
    "Encoder is made up of self-attn and feed forward (defined below)"
    def __init__(self, size, self_attn, feed_forward, dropout):
        super(EncoderLayer, self).__init__()
        self.self_attn = self_attn
        self.feed_forward = feed_forward
        self.sublayer = clones(SublayerConnection(size, dropout), 2)
        self.size = size

    def forward(self, x, mask):
        "Follow Figure 1 (left) for connections."
        x = self.sublayer[0](x, lambda x: self.self_attn(x, x, x, mask))
        return self.sublayer[1](x, self.feed_forward)



class Encoder(nn.Module):
    "Core encoder is a stack of N layers"
    def __init__(self, layer, N):
        super(Encoder, self).__init__()
        self.layers = clones(layer, N)
        self.norm = LayerNorm(layer.size)
        
    def forward(self, x, src_mask):
        "Pass the input through each layer in turn."
        for layer in self.layers:
            x = layer(x, src_mask)
        return self.norm(x)


class WordEncoder(nn.Module):
    """
    The overal model
    """
    def __init__(self, N, d_model, h, dropout):
        super(WordEncoder, self).__init__()
        d_ff = d_model * 4
        self.encoder = Encoder(EncoderLayer(d_model, 
                                            MultiHeadedAttention(h, d_model),
                                            PositionwiseFeedForward(d_model, d_ff, dropout), 
                                            dropout), N)
        self._reset()
    def forward(self, src, src_mask):
        "Take in and process masked src and target sequences."
        x = self.encoder(src, src_mask)
        return x[:,0,:]

    def _reset(self):
        for p in self.encoder.parameters():
            if p.dim() > 1:
                nn.init.xavier_uniform_(p)
        return