/
environment.yml
150 lines (150 loc) · 4.83 KB
/
environment.yml
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name:
/home/triller/Desktop/Projects/scLinear/analysis/scLinear_analysis_new/scLinear_appendix/renv/reticulate
channels:
- conda-forge
- bioconda
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- anndata=0.10.2=pyhd8ed1ab_0
- array-api-compat=1.4=pyhd8ed1ab_0
- brotli=1.1.0=hd590300_1
- brotli-bin=1.1.0=hd590300_1
- brotli-python=1.1.0=py39h3d6467e_1
- bzip2=1.0.8=h7f98852_4
- c-ares=1.20.1=hd590300_1
- ca-certificates=2023.7.22=hbcca054_0
- cached-property=1.5.2=hd8ed1ab_1
- cached_property=1.5.2=pyha770c72_1
- certifi=2023.7.22=pyhd8ed1ab_0
- charset-normalizer=3.3.1=pyhd8ed1ab_0
- colorama=0.4.6=pyhd8ed1ab_0
- contourpy=1.1.1=py39h7633fee_1
- cycler=0.12.1=pyhd8ed1ab_0
- exceptiongroup=1.1.3=pyhd8ed1ab_0
- filelock=3.12.4=pyhd8ed1ab_0
- fonttools=4.43.1=py39hd1e30aa_0
- freetype=2.12.1=h267a509_2
- fsspec=2023.10.0=pyhca7485f_0
- gmp=6.2.1=h58526e2_0
- gmpy2=2.1.2=py39h376b7d2_1
- h5py=3.10.0=nompi_py39h87cadad_100
- hdf5=1.14.2=nompi_h4f84152_100
- icu=73.2=h59595ed_0
- idna=3.4=pyhd8ed1ab_0
- importlib-metadata=6.8.0=pyha770c72_0
- importlib-resources=6.1.0=pyhd8ed1ab_0
- importlib_metadata=6.8.0=hd8ed1ab_0
- importlib_resources=6.1.0=pyhd8ed1ab_0
- jinja2=3.1.2=pyhd8ed1ab_1
- joblib=1.3.2=pyhd8ed1ab_0
- keyutils=1.6.1=h166bdaf_0
- kiwisolver=1.4.5=py39h7633fee_1
- krb5=1.21.2=h659d440_0
- lcms2=2.15=hb7c19ff_3
- ld_impl_linux-64=2.40=h41732ed_0
- lerc=4.0.0=h27087fc_0
- libabseil=20230802.1=cxx17_h59595ed_0
- libaec=1.1.2=h59595ed_1
- libblas=3.9.0=19_linux64_openblas
- libbrotlicommon=1.1.0=hd590300_1
- libbrotlidec=1.1.0=hd590300_1
- libbrotlienc=1.1.0=hd590300_1
- libcblas=3.9.0=19_linux64_openblas
- libcurl=8.4.0=hca28451_0
- libdeflate=1.19=hd590300_0
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=h516909a_1
- libffi=3.4.2=h7f98852_5
- libgcc-ng=13.2.0=h807b86a_2
- libgfortran-ng=13.2.0=h69a702a_2
- libgfortran5=13.2.0=ha4646dd_2
- libgomp=13.2.0=h807b86a_2
- libhwloc=2.9.3=default_h554bfaf_1009
- libiconv=1.17=h166bdaf_0
- libjpeg-turbo=3.0.0=hd590300_1
- liblapack=3.9.0=19_linux64_openblas
- libllvm14=14.0.6=hcd5def8_4
- libnghttp2=1.52.0=h61bc06f_0
- libnsl=2.0.1=hd590300_0
- libopenblas=0.3.24=pthreads_h413a1c8_0
- libpng=1.6.39=h753d276_0
- libprotobuf=4.24.3=hf27288f_1
- libsqlite=3.43.2=h2797004_0
- libssh2=1.11.0=h0841786_0
- libstdcxx-ng=13.2.0=h7e041cc_2
- libtiff=4.6.0=ha9c0a0a_2
- libuuid=2.38.1=h0b41bf4_0
- libuv=1.46.0=hd590300_0
- libwebp-base=1.3.2=hd590300_0
- libxcb=1.15=h0b41bf4_0
- libxml2=2.11.5=h232c23b_1
- libzlib=1.2.13=hd590300_5
- lightning-utilities=0.9.0=pyhd8ed1ab_0
- llvmlite=0.40.1=py39h174d805_0
- markupsafe=2.1.3=py39hd1e30aa_1
- matplotlib-base=3.8.0=py39he9076e7_2
- mpc=1.3.1=hfe3b2da_0
- mpfr=4.2.1=h9458935_0
- mpmath=1.3.0=pyhd8ed1ab_0
- munkres=1.1.4=pyh9f0ad1d_0
- natsort=8.4.0=pyhd8ed1ab_0
- ncurses=6.4=hcb278e6_0
- networkx=3.2=pyhd8ed1ab_1
- nomkl=1.0=h5ca1d4c_0
- numba=0.57.1=py39hb75a051_0
- numpy=1.24.4=py39h6183b62_0
- openjpeg=2.5.0=h488ebb8_3
- openssl=3.1.3=hd590300_0
- packaging=23.2=pyhd8ed1ab_0
- pandas=2.1.1=py39hddac248_1
- patsy=0.5.3=pyhd8ed1ab_0
- pillow=10.1.0=py39had0adad_0
- pip=23.3.1=pyhd8ed1ab_0
- pthread-stubs=0.4=h36c2ea0_1001
- pynndescent=0.5.10=pyh1a96a4e_0
- pyparsing=3.1.1=pyhd8ed1ab_0
- pysocks=1.7.1=pyha2e5f31_6
- python=3.9.18=h0755675_0_cpython
- python-dateutil=2.8.2=pyhd8ed1ab_0
- python-tzdata=2023.3=pyhd8ed1ab_0
- python_abi=3.9=4_cp39
- pytorch=2.0.0=cpu_generic_py39hf33c0be_3
- pytorch-lightning=2.1.0=pyhd8ed1ab_0
- pytz=2023.3.post1=pyhd8ed1ab_0
- pyyaml=6.0.1=py39hd1e30aa_1
- readline=8.2=h8228510_1
- requests=2.31.0=pyhd8ed1ab_0
- scanpy=1.9.5=pyhd8ed1ab_0
- scikit-learn=1.3.1=py39ha22ef79_1
- scipy=1.11.3=py39h474f0d3_1
- seaborn=0.13.0=hd8ed1ab_0
- seaborn-base=0.13.0=pyhd8ed1ab_0
- session-info=1.0.0=pyhd8ed1ab_0
- setuptools=68.2.2=pyhd8ed1ab_0
- six=1.16.0=pyh6c4a22f_0
- sleef=3.5.1=h9b69904_2
- statsmodels=0.14.0=py39h44dd56e_2
- stdlib-list=0.8.0=pyhd8ed1ab_0
- sympy=1.12=pypyh9d50eac_103
- tbb=2021.10.0=h00ab1b0_2
- threadpoolctl=3.2.0=pyha21a80b_0
- tk=8.6.13=h2797004_0
- torchmetrics=1.2.0=pyhd8ed1ab_0
- tqdm=4.66.1=pyhd8ed1ab_0
- typing-extensions=4.8.0=hd8ed1ab_0
- typing_extensions=4.8.0=pyha770c72_0
- tzdata=2023c=h71feb2d_0
- umap-learn=0.5.4=py39hf3d152e_0
- unicodedata2=15.1.0=py39hd1e30aa_0
- urllib3=2.0.7=pyhd8ed1ab_0
- wheel=0.41.2=pyhd8ed1ab_0
- xorg-libxau=1.0.11=hd590300_0
- xorg-libxdmcp=1.1.3=h7f98852_0
- xz=5.2.6=h166bdaf_0
- yaml=0.2.5=h7f98852_2
- zipp=3.17.0=pyhd8ed1ab_0
- zstd=1.5.5=hfc55251_0
prefix:
/home/triller/Desktop/Projects/scLinear/analysis/scLinear_analysis_new/scLinear_appendix/renv/reticulate