code.pipeline.rst

code.pipeline package

Submodules

code.pipeline.clean_input module

.. automodule:: code.pipeline.clean_input
    :members:
    :undoc-members:
    :show-inheritance:

code.pipeline.make_aggregate module

.. automodule:: code.pipeline.make_aggregate
    :members:
    :undoc-members:
    :show-inheritance:

code.pipeline.mixed2gaf module

.. automodule:: code.pipeline.mixed2gaf
    :members:
    :undoc-members:
    :show-inheritance:

code.pipeline.run_argot2 module

.. automodule:: code.pipeline.run_argot2
    :members:
    :undoc-members:
    :show-inheritance:

code.pipeline.run_iprs module

.. automodule:: code.pipeline.run_iprs
    :members:
    :undoc-members:
    :show-inheritance:

code.pipeline.run_mm_preproc module

.. automodule:: code.pipeline.run_mm_preproc
    :members:
    :undoc-members:
    :show-inheritance:

code.pipeline.run_pannzer module

.. automodule:: code.pipeline.run_pannzer
    :members:
    :undoc-members:
    :show-inheritance:

code.pipeline.run_rbh_blast module

.. automodule:: code.pipeline.run_rbh_blast
    :members:
    :undoc-members:
    :show-inheritance:

Module contents

.. automodule:: code.pipeline
    :members:
    :undoc-members:
    :show-inheritance: