The Human Ancestry Ontology (HAncestro) provides a systematic description of the ancestry concepts used in the NHGRI-EBI Catalog of published genome-wide association studies. It includes a list of countries, regions and major areas (essentially continents), as well as a fairly exhaustive list of defined ancestral categories, uncategorised ancestral categories and population isolates.
The following HANCESTRO release files are provided
- https://github.com/EBISPOT/ancestro/blob/master/hancestro_inferred.owl - pre-inferred version of HANCESTRO
Please cite Joannella Morales, Danielle Welter, Emily H. Bowler, Maria Cerezo, Laura W. Harris, Aoife C. McMahon, Peggy Hall, Heather A. Junkins, Annalisa Milano, Emma Hastings, Cinzia Malangone, Annalisa Buniello, Tony Burdett, Paul Flicek, Helen Parkinson, Fiona Cunningham, Lucia A. Hindorff and Jacqueline A. L. MacArthur. A standardized framework for representation of ancestry data in genomics studies, with application to the NHGRI-EBI GWAS Catalog. Genome Biology, 2018, 19:21
To reference a specific version of the ontology, please provide a link to this GITHUB repo, including the tag for the version you downloaded and the date of the download.
Ancestry Ontology - Release Notes
Date Released: 6th July 2018
Class Count: 556
Please note that in v2.0 of the ontology, all identifiers have changed for ANCESTRO to HANCESTRO.
Notice of release
HANCESTRO v2.0 reflects the information published in our recent paper A standardized framework for representation of ancestry data in genomics studies, with application to the NHGRI-EBI GWAS Catalog.
Stable release versions
The latest version of the ontology can always be found at:
(note this will not show up until the request has been approved by obofoundry.org)
Editors of this ontology should use the edit version, src/ontology/hancestro-edit.owl
Please use this GitHub repository's Issue tracker to request new terms/classes or report errors or specific concerns related to the ontology.
This ontology repository was created using the ontology starter kit