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Open Targets therapeutic area: Congenital, familial and genetic disorders #493
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(TA = therapeutic area) Comments on the request to have: In #463 we agreed that NOTE FOR SELF (update 20/8/2019) need to check with Zoe: EFO MONDO:0000839 congenital abnormality As for ‘familial’ disorders: If a TA is desired to group “Congenital, familial and genetic disorders” together, we could probably create it as a parent of genetic disorder/inherited genetic disease and congenital abnormality. We should then assign TA status to the grouping superclass and remove it from genetic disorder. (*) Note for self: e.g. |
Proposed plan:
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Note for self: may need to address the issue of how to classify diseases that have a genetic basis, but are due to de novo mutations, i.e. not present in the parents; mutations that may be present at birth (congenital), as opposed to occurring later in life (i.e. in cancers). See e.g. Menke-Hennekam syndrome 1 and 2 (OMIM entries). Also, check large chromosomal anomalies like Down syndrome, where parents surely do not have the same mutation. |
Note for self: there may be some useful discussion on nomenclature here monarch-initiative/mondo#1175 |
Proposed TA name: Congenital, familial and genetic disorders
Current EFO TA name: 3 Terms exist: Congenital abnormality, Genetic disorder, Inherited genetic disease (IS NOT A TA AT THE MOMENT)
Priority for OT: High
Justification: Understanding whether a disease is caused by genes (and) or the environment is of crucial important in the assessment of drug safety. Therefore, a new TA should be created to incorporate congenital, familial and genetic disorders.
Related issue: Issue 463
Congenital = existing at, and usually before, birth; referring to conditions that are present at birth, regardless of their causation. https://www.thefreedictionary.com/Congential
Familial = occurring in or affecting members of a family more than would be expected by chance. https://www.thefreedictionary.com/familial
genetic = a. Of or relating to genetics or genes. b. Affecting or determined by genes https://www.thefreedictionary.com/genetic
Currently in EFO - Familial disease only exists as a specific type of disease in EFO
[OLS views of:
congenital
genetic disorder
familial cardiomyopathy]
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