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User's Guide

Cristina Yenyxe Gonzalez Garcia edited this page Jan 8, 2019 · 9 revisions

The VCF Validation Suite is a set of programs that you can download and execute in your computer using a terminal (called "command prompt" on Windows, and "terminal" or "console" in Linux and macOS).

You can download all three programs (vcf_validator, vcf_debugulator and vcf_assembly_checker) from the releases page. Note that the tools are available for Linux, macOS and Windows.

You may particularly be interested in the vcf_validator which checks compliance with the VCF specification.

Read the for the instructions on how to run these tools. Running the tools with --help will also briefly explain the available parameters.

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