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Makefile
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Makefile
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#GCC Compilers:
CC = gcc
CPP = g++
CFLAGS = -g -Ofast -fopenmp -std=c99
CPPFLAGS = -g -Ofast -fopenmp
#-DVEC_ILOOP_SUMVDEG
#-DSPLIT_LOOP_SUMVDEG -DUSE_OMP_DYNAMIC
METIS_HOME = $(HOME)/metis-5.1.0
METIS_INCLUDE = -I$(METIS_HOME)/include
METIS_LIB = -L$(METIS_HOME)/lib -lmetis -lm
LDFLAGS = $(CPPFLAGS)
#INCLUDES = ./DefineStructure/
INCLUDES = ./DefineStructure/ $(METIS_INCLUDE)
IOFOLDER = ./InputsOutput
COFOLDER = ./BasicCommunitiesDetection
UTFOLDER = ./Utility
CLFOLDER = ./Coloring
FSFOLDER = ./FullSyncOptimization
LIBS = -lm
USE_PMEM_ALLOC=0
ifeq ($(USE_PMEM_ALLOC),1)
MEMKIND_PATH=$(HOME)/builds/memkind
CPPFLAGS += -I$(MEMKIND_PATH)/include -DUSE_PMEM_ALLOC
LIBS += -Wl,-rpath=$(MEMKIND_PATH)/lib -L$(MEMKIND_PATH)/lib -lmemkind
LDFLAGS += $(LIBS)
endif
TARGET_1 = convertFileToBinary
TARGET_2 = driverForGraphClusteringApprox
TARGET_3 = driverForColoring
TARGET_4 = driverForGraphClustering
TARGET_6 = driverForGraphClusteringFastTrackResistance
TARGET_7 = driverForClusterComparison
TARGET_8 = convertSNAPGroundTruthInformation
TARGET_9 = driverForMatrixReordering
TARGET_10 = driverForMatrixReorderingRcm
TARGET_11 = driverForPartitioningWithMetis
TARGET_12 = driverForMatrixReorderingND
#TARGET = $(TARGET_1) $(TARGET_2) $(TARGET_4) $(TARGET_7) $(TARGET_8) $(TARGET_9) $(TARGET_10)
#TARGET = $(TARGET_4) $(TARGET_7) $(TARGET_9) $(TARGET_10) $(TARGET_11) $(TARGET_12)
#TARGET = $(TARGET_4) $(TARGET_7)
TARGET = $(TARGET_1) $(TARGET_4) $(TARGET_6) $(TARGET_7)
# $(TARGET_3) $(TARGET_4) $(TARGET_5)
#TARGET = $(TARGET_1) $(TARGET_2) $(TARGET_3) $(TARGET_4)
TARGET_H5 = driverForGraphClusteringH5
#IOBJECTS = loadBinary.o loadMetis.o loadMatrixMarket.o \
loadEdgeList.o
IOFILES = $(wildcard $(IOFOLDER)/*.cpp)
IOOBJECTS = $(addprefix $(IOFOLDER)/,$(notdir $(IOFILES:.cpp=.o)))
COFILES = $(wildcard $(COFOLDER)/*.cpp)
COOBJECTS = $(addprefix $(COFOLDER)/,$(notdir $(COFILES:.cpp=.o)))
UTFILES = $(wildcard $(UTFOLDER)/*.cpp)
UTOBJECTS = $(addprefix $(UTFOLDER)/,$(notdir $(UTFILES:.cpp=.o)))
CLFILES = $(wildcard $(CLFOLDER)/*.cpp)
CLOBJECTS = $(addprefix $(CLFOLDER)/,$(notdir $(CLFILES:.cpp=.o)))
CLFILES2 = coloringDistanceOne.o equitableColoringDistanceOne.o coloringUtils.cpp
CLOBJECTS2 = $(addprefix $(CLFOLDER)/,$(notdir $(CLFILES2:.cpp=.o)))
FSFILES = $(wildcard $(FSFOLDER)/*.cpp)
FSOBJECTS = $(addprefix $(FSFOLDER)/,$(notdir $(FSFILES:.cpp=.o)))
#OBJECTS = RngStream.o utilityFunctions.o parseInputFiles.o \
writeGraphDimacsFormat.o buildNextPhase.o \
coloringDistanceOne.o utilityClusteringFunctions.o equitableColoringDistanceOne.o\
parallelLouvainMethod.o parallelLouvainMethodNoMap.o \
parallelLouvainMethodScale.o parallelLouvainWithColoring.o parallelLouvainWithColoringNoMap.o \
louvainMultiPhaseRun.o parseInputParameters.o vertexFollowing.o parallelLouvianMethodApprox.o runMultiPhaseBasicApprox.o
all: $(TARGET)
coloring: $(TARGET_3)
hdf5: $(TARGET_H5)
mtx: $(TARGET_9) $(TARGET_10)
#message
$(TARGET_1): $(IOOBJECTS) $(UTOBJECTS) $(TARGET_1).o
$(CPP) $(LDFLAGS) -o ./$(TARGET_1) $(UTOBJECTS) $(IOOBJECTS) $(TARGET_1).o
$(TARGET_3): $(IOOBJECTS) $(CLOBJECTS2) $(UTOBJECTS) $(TARGET_3).o
$(CPP) $(LDFLAGS) -o ./$(TARGET_3) $(IOOBJECTS) $(UTOBJECTS) $(CLOBJECTS2) $(TARGET_3).o
$(TARGET_2): $(IOOBJECTS) $(COOBJECTS) $(UTOBJECTS) $(FSOBJECTS) $(CLOBJECTS) $(TARGET_2).o
$(CPP) $(LDFLAGS) -o ./$(TARGET_2) $(TARGET_2).o $(FSOBJECTS) $(IOOBJECTS) $(COOBJECTS) $(UTOBJECTS) $(CLOBJECTS) $(LIBS)
$(TARGET_4): $(IOOBJECTS) $(COOBJECTS) $(UTOBJECTS) $(FSOBJECTS) $(CLOBJECTS) $(TARGET_4).o
$(CPP) $(LDFLAGS) -o ./$(TARGET_4) $(TARGET_4).o $(FSOBJECTS) $(IOOBJECTS) $(COOBJECTS) $(UTOBJECTS) $(CLOBJECTS) $(LDFLAGS)
$(TARGET_6): $(IOOBJECTS) $(COOBJECTS) $(UTOBJECTS) $(FSOBJECTS) $(CLOBJECTS) $(TARGET_6).o
$(CPP) $(LDFLAGS) -o ./$(TARGET_6) $(TARGET_6).o $(FSOBJECTS) $(IOOBJECTS) $(COOBJECTS) $(UTOBJECTS) $(CLOBJECTS) $(LIBS)
$(TARGET_7): $(UTOBJECTS) $(TARGET_7).o
$(CPP) $(LDFLAGS) -o ./$(TARGET_7) $(UTOBJECTS) $(IOOBJECTS) $(TARGET_7).o $(LDFLAGS)
$(TARGET_8): $(UTOBJECTS) $(TARGET_8).o
$(CPP) $(LDFLAGS) -o ./$(TARGET_8) $(UTOBJECTS) $(IOOBJECTS) $(TARGET_8).o $(LDFLAGS)
$(TARGET_9): $(IOOBJECTS) $(COOBJECTS) $(UTOBJECTS) $(FSOBJECTS) $(CLOBJECTS) $(TARGET_9).o
$(CPP) $(LDFLAGS) -o ./$(TARGET_9) $(TARGET_9).o $(FSOBJECTS) $(IOOBJECTS) $(COOBJECTS) $(UTOBJECTS) $(CLOBJECTS) $(LIBS)
$(TARGET_10): $(IOOBJECTS) $(COOBJECTS) $(UTOBJECTS) $(FSOBJECTS) $(CLOBJECTS) $(TARGET_10).o
$(CPP) $(LDFLAGS) -o ./$(TARGET_10) $(TARGET_10).o $(FSOBJECTS) $(IOOBJECTS) $(COOBJECTS) $(UTOBJECTS) $(CLOBJECTS) $(LIBS)
$(TARGET_11): $(IOOBJECTS) $(COOBJECTS) $(UTOBJECTS) $(FSOBJECTS) $(CLOBJECTS) $(TARGET_11).o
$(CPP) $(LDFLAGS) -o ./$(TARGET_11) $(TARGET_11).o $(FSOBJECTS) $(IOOBJECTS) $(COOBJECTS) $(UTOBJECTS) $(CLOBJECTS) $(METIS_LIB)
$(TARGET_12): $(IOOBJECTS) $(COOBJECTS) $(UTOBJECTS) $(FSOBJECTS) $(CLOBJECTS) $(TARGET_12).o
$(CPP) $(LDFLAGS) -o ./$(TARGET_12) $(TARGET_12).o $(FSOBJECTS) $(IOOBJECTS) $(COOBJECTS) $(UTOBJECTS) $(CLOBJECTS) $(METIS_LIB)
.c.o:
$(CC) $(CFLAGS) $(LDFLAGS) -c $< -I$(INCLUDES) -o $@
.cpp.o:
$(CPP) $(CPPFLAGS) $(LDFLAGS) -c $< -I$(INCLUDES) -o $@
$(IOFOLDER)/%.o: $(IOFOLDER)/%.cpp
$(CPP) $(CPPFLAGS) $(LDFLAGS) -c $< -I$(INCLUDES) -o $@
$(COFOLDER)/%.o: $(COFOLDER)/%.cpp
$(CPP) $(CPPFLAGS) $(LDFLAGS) -c $< -I$(INCLUDES) -o $@
$(UTFOLDER)/%.o: $(UTFOLDER)/%.cpp
$(CPP) $(CPPFLAGS) $(LDFLAGS) -c $< -I$(INCLUDES) -o $@
clean:
rm -f *.o $(TARGET_1).o $(TARGET_2).o $(TARGET_3).o $(FSFOLDER)/*.o $(IOFOLDER)/*.o $(COFOLDER)/*.o $(UTFOLDER)/*.o $(CLFOLDER)/*.o blosc_filter/*.so
#wipe:
# rm -f $(TARGET).o $(OBJECTS) $(TARGET) *~ *.bak
message:
echo "Executables: " $(TARGET) " have been created"
print-%: ; @echo $*=$($*)
#HDF5 PARSER
BLOSC_FILTER_ROOT=blosc_filter
BLOSC_FILTER_LIB=$(BLOSC_FILTER_ROOT)/blosc_filter.so
HDF_INC=$(HDF5_ROOT)/include
HDF_LIB=$(HDF5_ROOT)/lib
IOFILESH5 = $(wildcard $(IOFOLDER)/*.cc)
IOOBJECTSH5 = $(addprefix $(IOFOLDER)/,$(notdir $(IOFILESH5:.cc=.o)))
$(TARGET_H5): $(BLOSC_FILTER_LIB) $(IOOBJECTS) $(IOOBJECTSH5) $(COOBJECTS) $(UTOBJECTS) $(FSOBJECTS) $(CLOBJECTS) $(TARGET_4).o
$(CPP) -DUSEHDF5 $(LDFLAGS) -o ./$(TARGET_H5) $(TARGET_4).o $(BLOSC_FILTER_LIB) $(FSOBJECTS) \
$(IOOBJECTS) $(IOOBJECTSH5) $(COOBJECTS) $(UTOBJECTS) $(CLOBJECTS) $(LIBS) -L$(BLOSC_ROOT)/lib -lblosc -L$(HDF_LIB) -lhdf5 -lhdf5_cpp
$(IOFOLDER)/%.o: $(IOFOLDER)/%.cc
$(CPP) $(CPPFLAGS) -c $< -I$(INCLUDES) -I$(HDF_INC) -I$(BLOSC_ROOT)/include -I$(BLOSC_FILTER_ROOT) -o $@
$(BLOSC_FILTER_LIB):
make -C $(BLOSC_FILTER_ROOT)