jost.md

Lou Jost's diversity measures are found in the Diversity.Jost package.

Usage

Accessing the main functionality in the package is simple:

julia> using Diversity.Jost

julia> ecosystem = [2 2 0; 0 2 2]';

julia> ecosystem /= sum(ecosystem);

julia> diversities = jostbeta(ecosystem, [0, 1, 2])
3×8 DataFrame
│ Row │ div_type │ measure  │ q     │ type_level │ type_name │ partition_level │ partition_name │ diversity │
│     │ String   │ String   │ Int64 │ String     │ String    │ String          │ String         │ Float64   │
├─────┼──────────┼──────────┼───────┼────────────┼───────────┼─────────────────┼────────────────┼───────────┤
│ 1   │ Unique   │ JostBeta │ 0     │ types      │           │ metacommunity   │                │ 1.5       │
│ 2   │ Unique   │ JostBeta │ 1     │ types      │           │ metacommunity   │                │ 1.41421   │
│ 3   │ Unique   │ JostBeta │ 2     │ types      │           │ metacommunity   │                │ 1.33333   │

Modules = [Diversity.Jost]
Private = false