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xyz

.. todo::  This command has not yet been ported to the *new APBS syntax* (see :ref:`new_input_format`).

For each molecule in the system and for each trajectory, specify a xyz file for the starting position of that molecule. The syntax is:

xyz {molecule_id} {filename}
molecule_id
An integer (starting at 1) of the molecule index from the READ section
filename
The name of the file for the xyz coordinates of the molecule center for a given trajectory. The trajectories for a given molecule should be ordered sequentially in the ELEC section.
.. todo::

   It would be nice to incorporate the ``xyz`` functionality into the :ref:`read_old_input` block.
   Documented in https://github.com/Electrostatics/apbs/issues/505