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In Siibra Explorer make volume tuning sharable #1273

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PolarBean opened this issue Dec 7, 2022 · 2 comments
Open

In Siibra Explorer make volume tuning sharable #1273

PolarBean opened this issue Dec 7, 2022 · 2 comments

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@PolarBean
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PolarBean commented Dec 7, 2022

Dear Siibra team,

Thanks to the excellent new feature you implemented we can now share links to nii volumes and precomputed ng chunks in siibra.
#1252

This is fantastic, is it possible to also make the specific tuning parameters sharable? For instance if I adjust the color-map and the default high threshold can these then be the default values once a link is shared? If I could add this as URL parameters this would be perfect. If this is not possible I can simply adjust the min and max values of the volume so that it looks better with the default values of the viewer.

many thanks!

all the best,

Harry

@xgui3783
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xgui3783 commented Dec 7, 2022

While implementing #1252 , I actually have similar ideas, but I am potentially concerned re: packaging these values in url parameter.

I am considering an alternative, such as a metadata file at nifti://{path-to-nii}/.siibra-explorer-layer-cfg.json (not yet decided on the filename), which will be fetched in order to populate the colormap, min threshold etc. This means, in addition of uploading the nii volume, you would prepare and upload an additional json file.

@PolarBean
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That's a great idea

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