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Not using 10um stpt for the mouse ccf #1335

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PolarBean opened this issue Jun 1, 2023 · 0 comments

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PolarBean commented Jun 1, 2023

I noticed in the info file siibra uses for the mouse stpt volume it doesnt include the 10um volume.
https://neuroglancer.humanbrainproject.eu/precomputed/AMBA/templates/v3/stpt/info
The 10um stpt alongside the 10um annotations are much smoother and would look cool in siibra.

The 10um template can be found here: https://download.alleninstitute.org/informatics-archive/current-release/mouse_ccf/average_template/
and the 10um annotations (for 2017) can be found here: https://download.alleninstitute.org/informatics-archive/current-release/mouse_ccf/annotation/ccf_2017/
alongiside 2015: https://download.alleninstitute.org/informatics-archive/current-release/mouse_ccf/annotation/ccf_2015/

xgui3783 mentioned this issue

support 10um allen mouse ccf v3 FZJ-INM1-BDA/siibra-python#465

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xgui3783 added the blocked label

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