You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
New versions of Samtools seem to add lots of lines starting with @PQ, and this seems to screw up the single-end/paired-end auto detection of deduplicate_bismark and bismark_methylation_extractor.
In the methylation course we have seen PE files being processed as SE.
The text was updated successfully, but these errors were encountered:
New versions of Samtools seem to add lots of lines starting with
@PQ
, and this seems to screw up the single-end/paired-end auto detection ofdeduplicate_bismark
andbismark_methylation_extractor
.In the methylation course we have seen PE files being processed as SE.
The text was updated successfully, but these errors were encountered: