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DwcEventDQTest.java
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DwcEventDQTest.java
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/** DwcEventDQTest.java
*
* Copyright 2016 President and Fellows of Harvard College
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.filteredpush.qc.date;
import static org.junit.Assert.*;
import org.apache.commons.logging.Log;
import org.apache.commons.logging.LogFactory;
import org.datakurator.ffdq.api.EnumDQAmendmentResultState;
import org.datakurator.ffdq.api.EnumDQMeasurementResult;
import org.datakurator.ffdq.api.EnumDQResultState;
import org.datakurator.ffdq.api.EnumDQValidationResult;
import org.junit.Test;
/**
* @author mole
*
*/
public class DwcEventDQTest {
private static final Log logger = LogFactory.getLog(DwcEventDQTest.class);
@Test
public void testMeasureDuration() {
EventDQMeasurement<Long> measure = DwCEventDQ.measureDurationSeconds("1880-05-08");
Long seconds = (60l*60l*24l)-1l;
assertEquals(seconds, measure.getValue());
assertEquals(EnumDQResultState.RUN_HAS_RESULT, measure.getResultState());
measure = DwCEventDQ.measureDurationSeconds("1880-05");
seconds = (60l*60l*24l*31)-1l;
assertEquals(seconds, measure.getValue());
assertEquals(EnumDQResultState.RUN_HAS_RESULT, measure.getResultState());
measure = DwCEventDQ.measureDurationSeconds("");
assertEquals(EnumDQResultState.INTERNAL_PREREQUISITES_NOT_MET, measure.getResultState());
}
/**
* Test method for {@link org.filteredpush.qc.date.DwCEventDQ#isDayInRange(java.lang.String)}.
*/
@Test
public void testIsDayInRange() {
EventDQValidation result = null;
for (int i = 1; i<=31; i++) {
result = DwCEventDQ.isDayInRange(Integer.toString(i));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.COMPLIANT, result.getResult());
}
result = DwCEventDQ.isDayInRange(" 1 ");
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.COMPLIANT, result.getResult());
result = DwCEventDQ.isDayInRange("01");
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.COMPLIANT, result.getResult());
int i=0;
result = DwCEventDQ.isDayInRange(Integer.toString(i));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
i=32;
result = DwCEventDQ.isDayInRange(Integer.toString(i));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
i=-1;
result = DwCEventDQ.isDayInRange(Integer.toString(i));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
i=Integer.MAX_VALUE;
result = DwCEventDQ.isDayInRange(Integer.toString(i));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
i=Integer.MIN_VALUE;
result = DwCEventDQ.isDayInRange(Integer.toString(i));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
result = DwCEventDQ.isDayInRange(null);
assertEquals(EnumDQResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
result = DwCEventDQ.isDayInRange("");
assertEquals(EnumDQResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
result = DwCEventDQ.isDayInRange(" ");
assertEquals(EnumDQResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
result = DwCEventDQ.isDayInRange("A");
assertEquals(EnumDQResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
result = DwCEventDQ.isDayInRange("1.5");
assertEquals(EnumDQResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
result = DwCEventDQ.isDayInRange("**");
assertEquals(EnumDQResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
result = DwCEventDQ.isDayInRange("1st");
assertEquals(EnumDQResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
result = DwCEventDQ.isDayInRange("2nd");
assertEquals(EnumDQResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
}
/**
* Test method for {@link org.filteredpush.qc.date.DwCEventDQ#isMonthInRange(java.lang.String)}.
*/
@Test
public void testIsMonthInRange() {
EventDQValidation result = null;
for (int i = 1; i<=12; i++) {
result = DwCEventDQ.isMonthInRange(Integer.toString(i));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.COMPLIANT, result.getResult());
}
result = DwCEventDQ.isMonthInRange(" 1 ");
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.COMPLIANT, result.getResult());
result = DwCEventDQ.isMonthInRange("01");
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.COMPLIANT, result.getResult());
int i=0;
result = DwCEventDQ.isMonthInRange(Integer.toString(i));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
i=13;
result = DwCEventDQ.isMonthInRange(Integer.toString(i));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
i=-1;
result = DwCEventDQ.isMonthInRange(Integer.toString(i));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
i=Integer.MAX_VALUE;
result = DwCEventDQ.isMonthInRange(Integer.toString(i));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
i=Integer.MIN_VALUE;
result = DwCEventDQ.isMonthInRange(Integer.toString(i));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
result = DwCEventDQ.isMonthInRange(null);
assertEquals(EnumDQResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
result = DwCEventDQ.isMonthInRange("");
assertEquals(EnumDQResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
result = DwCEventDQ.isMonthInRange(" ");
assertEquals(EnumDQResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
result = DwCEventDQ.isMonthInRange("A");
assertEquals(EnumDQResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
result = DwCEventDQ.isMonthInRange("1.5");
assertEquals(EnumDQResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
result = DwCEventDQ.isMonthInRange("**");
assertEquals(EnumDQResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
result = DwCEventDQ.isMonthInRange("Jan");
assertEquals(EnumDQResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
result = DwCEventDQ.isMonthInRange("January");
assertEquals(EnumDQResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
}
@Test
public void testDurationInYear() {
EventDQValidation result = null;
for (int i = 1981; i<=1983; i++) {
// not leap years
result = DwCEventDQ.isEventDateJulianYearOrLess(Integer.toString(i));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.COMPLIANT, result.getResult());
result = DwCEventDQ.isEventDateYearOrLess(Integer.toString(i));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.COMPLIANT, result.getResult());
}
// Leap year
result = DwCEventDQ.isEventDateJulianYearOrLess("1980");
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
result = DwCEventDQ.isEventDateYearOrLess("1980");
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.COMPLIANT, result.getResult());
}
/**
* Test method for {@link org.filteredpush.qc.date.DwCEventDQ#isDayPossibleForMonthYear(java.lang.String, java.lang.String, java.lang.String)}.
*/
@Test
public void testIsDayPossibleForMonthYear() {
EventDQValidation result = null;
for (int year = 1900; year<=1903; year++) {
for (int month = 1; month<=12; month++) {
for (int day= 1; day<=27; day++) {
result = DwCEventDQ.isDayPossibleForMonthYear(Integer.toString(year), Integer.toString(month), Integer.toString(day));
logger.debug(year + " " + month + " " + day);
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.COMPLIANT, result.getResult());
}
}
}
// Not a leap year
int year = 2001;
int month = 2;
int day = 28;
result = DwCEventDQ.isDayPossibleForMonthYear(Integer.toString(year), Integer.toString(month), Integer.toString(day));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.COMPLIANT, result.getResult());
year = 2001;
month = 2;
day = 29;
result = DwCEventDQ.isDayPossibleForMonthYear(Integer.toString(year), Integer.toString(month), Integer.toString(day));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
year = 2001;
month = 2;
day = 30;
result = DwCEventDQ.isDayPossibleForMonthYear(Integer.toString(year), Integer.toString(month), Integer.toString(day));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
// Leap year
year = 2000;
month = 2;
day = 29;
result = DwCEventDQ.isDayPossibleForMonthYear(Integer.toString(year), Integer.toString(month), Integer.toString(day));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.COMPLIANT, result.getResult());
year = 2000;
month = 2;
day = 30;
result = DwCEventDQ.isDayPossibleForMonthYear(Integer.toString(year), Integer.toString(month), Integer.toString(day));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
year = 2000;
month = 2;
day = 31;
result = DwCEventDQ.isDayPossibleForMonthYear(Integer.toString(year), Integer.toString(month), Integer.toString(day));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
}
/**
* Test method for {@link org.filteredpush.qc.date.DwCEventDQ#dayMonthTransposition(java.lang.String, java.lang.String)}.
*/
@Test
public void testDayMonthTransposition() {
String month = "30";
String day = "11";
EventDQAmendment result = DwCEventDQ.dayMonthTransposition(month,day);
assertEquals(EnumDQAmendmentResultState.TRANSPOSED, result.getResultState());
assertEquals("11",result.getResult().get("dwc:month"));
assertEquals("30",result.getResult().get("dwc:day"));
result = DwCEventDQ.dayMonthTransposition(day,month);
assertEquals(EnumDQAmendmentResultState.NO_CHANGE, result.getResultState());
day = "5";
month = "11";
result = DwCEventDQ.dayMonthTransposition(month,day);
assertEquals(EnumDQAmendmentResultState.NO_CHANGE, result.getResultState());
day = "15";
month = "8";
result = DwCEventDQ.dayMonthTransposition(month,day);
assertEquals(EnumDQAmendmentResultState.NO_CHANGE, result.getResultState());
day = "15";
month = "15";
result = DwCEventDQ.dayMonthTransposition(month,day);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
day = "15";
month = "34";
result = DwCEventDQ.dayMonthTransposition(month,day);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
day = "-1";
month = "15";
result = DwCEventDQ.dayMonthTransposition(month,day);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
day = "-1";
month = "5";
result = DwCEventDQ.dayMonthTransposition(month,day);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
result = DwCEventDQ.dayMonthTransposition(day,"");
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
}
@Test
public void testExtractDateFromVerbatim() {
String eventDate = "";
String verbatimEventDate = "Jan 1884";
EventDQAmendment result = DwCEventDQ.extractDateFromVerbatim(eventDate,verbatimEventDate);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("1884-01",result.getResult().get("dwc:eventDate"));
assertEquals(1,result.getResult().size());
verbatimEventDate = "1 Mar 1884";
result = DwCEventDQ.extractDateFromVerbatim(eventDate,verbatimEventDate);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("1884-03-01",result.getResult().get("dwc:eventDate"));
assertEquals(1,result.getResult().size());
eventDate = "1884";
verbatimEventDate = "1 Mar 1884";
result = DwCEventDQ.extractDateFromVerbatim(eventDate,verbatimEventDate);
assertEquals(EnumDQAmendmentResultState.NO_CHANGE, result.getResultState());
assertEquals(0,result.getResult().size());
eventDate = "1884-03-01";
verbatimEventDate = "1 Mar 1884";
result = DwCEventDQ.extractDateFromVerbatim(eventDate,verbatimEventDate);
assertEquals(EnumDQAmendmentResultState.NO_CHANGE, result.getResultState());
assertEquals(0,result.getResult().size());
eventDate = null;
verbatimEventDate = "";
result = DwCEventDQ.extractDateFromVerbatim(eventDate,verbatimEventDate);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
assertEquals(0,result.getResult().size());
eventDate = null;
verbatimEventDate = "5-8-1884";
result = DwCEventDQ.extractDateFromVerbatim(eventDate,verbatimEventDate);
assertEquals(EnumDQAmendmentResultState.AMBIGUOUS, result.getResultState());
assertEquals("1884-05-08/1884-08-05",result.getResult().get("dwc:eventDate"));
assertEquals(1,result.getResult().size());
eventDate = null;
verbatimEventDate = "2001/Feb/29";
result = DwCEventDQ.extractDateFromVerbatim(eventDate,verbatimEventDate);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
assertEquals(0,result.getResult().size());
}
@Test
public void testCorrectEventDateFormat() {
String eventDate = "Jan 1884";
EventDQAmendment result = DwCEventDQ.correctEventDateFormat(eventDate);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("1884-01",result.getResult().get("dwc:eventDate"));
assertEquals(1,result.getResult().size());
eventDate = "1 Jan 1884";
result = DwCEventDQ.correctEventDateFormat(eventDate);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("1884-01-01",result.getResult().get("dwc:eventDate"));
assertEquals(1,result.getResult().size());
/* Case that inspired adding this method, typical use of / instead of - in dates.
*/
eventDate = "1884/01/02";
result = DwCEventDQ.correctEventDateFormat(eventDate);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("1884-01-02",result.getResult().get("dwc:eventDate"));
assertEquals(1,result.getResult().size());
eventDate = "1884-01-02";
result = DwCEventDQ.correctEventDateFormat(eventDate);
assertEquals(EnumDQAmendmentResultState.NO_CHANGE, result.getResultState());
eventDate = "";
result = DwCEventDQ.correctEventDateFormat(eventDate);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
result = DwCEventDQ.correctEventDateFormat(null);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
eventDate = "2305345ifo342fd,cofaga";
result = DwCEventDQ.correctEventDateFormat(eventDate);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
eventDate = "02/03/1884";
result = DwCEventDQ.correctEventDateFormat(eventDate);
assertEquals(EnumDQAmendmentResultState.AMBIGUOUS, result.getResultState());
assertEquals("1884-02-03/1884-03-02",result.getResult().get("dwc:eventDate"));
assertEquals(1,result.getResult().size());
}
@Test
public void testEventDateFromYearStartEndDay() {
String eventDate = "";
String year = "1980";
String startDay = "5";
String endDay = "6";
EventDQAmendment result = DwCEventDQ.eventDateFromYearStartEndDay(eventDate, year, startDay, endDay);
assertEquals(EnumDQAmendmentResultState.FILLED_IN,result.getResultState());
assertEquals("1980-01-05/1980-01-06", result.getResult().get("dwc:eventDate"));
eventDate = "1980"; // eventDate contains a value
year = "1980";
startDay = "5";
endDay = "6";
result = DwCEventDQ.eventDateFromYearStartEndDay(eventDate, year, startDay, endDay);
assertEquals(EnumDQAmendmentResultState.NOT_RUN,result.getResultState());
eventDate = "";
year = "1980";
startDay = "day5"; // not a number
endDay = "6";
result = DwCEventDQ.eventDateFromYearStartEndDay(eventDate, year, startDay, endDay);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET,result.getResultState());
eventDate = "";
year = "1980"; // a leap year
startDay = "1";
endDay = "366";
result = DwCEventDQ.eventDateFromYearStartEndDay(eventDate, year, startDay, endDay);
assertEquals(EnumDQAmendmentResultState.FILLED_IN,result.getResultState());
assertEquals("1980-01-01/1980-12-31", result.getResult().get("dwc:eventDate"));
eventDate = "";
year = "1981"; // not a leap year
startDay = "1";
endDay = "365";
result = DwCEventDQ.eventDateFromYearStartEndDay(eventDate, year, startDay, endDay);
assertEquals(EnumDQAmendmentResultState.FILLED_IN,result.getResultState());
assertEquals("1981-01-01/1981-12-31", result.getResult().get("dwc:eventDate"));
eventDate = "";
year = "1981"; // not a leap year
startDay = "45";
endDay = "280";
result = DwCEventDQ.eventDateFromYearStartEndDay(eventDate, year, startDay, endDay);
assertEquals(EnumDQAmendmentResultState.FILLED_IN,result.getResultState());
assertEquals("1981-02-14/1981-10-07", result.getResult().get("dwc:eventDate"));
eventDate = "";
year = "1980"; // a leap year
startDay = "45"; // spans leap day
endDay = "280";
result = DwCEventDQ.eventDateFromYearStartEndDay(eventDate, year, startDay, endDay);
assertEquals(EnumDQAmendmentResultState.FILLED_IN,result.getResultState());
assertEquals("1980-02-14/1980-10-06", result.getResult().get("dwc:eventDate"));
eventDate = "";
year = "1981"; // not a leap year
startDay = "1";
endDay = "366";
result = DwCEventDQ.eventDateFromYearStartEndDay(eventDate, year, startDay, endDay);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET,result.getResultState());
eventDate = "";
year = "1980";
startDay = "900"; // out of range
endDay = "920";
result = DwCEventDQ.eventDateFromYearStartEndDay(eventDate, year, startDay, endDay);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET,result.getResultState());
eventDate = "";
year = "1980";
startDay = "200"; // start and end reversed or in different years.
endDay = "10";
result = DwCEventDQ.eventDateFromYearStartEndDay(eventDate, year, startDay, endDay);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET,result.getResultState());
// Example given in TG2 definition:
//dwc:year=1999, dwc:startDayOfYear=123, dwc:endDayOfYear=125
//therefore dwc:eventDate=1999-05-03/1999-05-05
eventDate = "";
year = "1999";
startDay = "123";
endDay = "125";
result = DwCEventDQ.eventDateFromYearStartEndDay(eventDate, year, startDay, endDay);
assertEquals(EnumDQAmendmentResultState.FILLED_IN,result.getResultState());
assertEquals("1999-05-03/1999-05-05", result.getResult().get("dwc:eventDate"));
}
@Test
public void testEventDateFromMonthDay() {
String eventDate = "";
String year = "1980";
String month = "5";
String day = "6";
EventDQAmendment result = DwCEventDQ.eventDateFromYearMonthDay(eventDate, year, month, day);
assertEquals(EnumDQAmendmentResultState.FILLED_IN,result.getResultState());
assertEquals("1980-05-06", result.getResult().get("dwc:eventDate"));
eventDate = "1980"; // eventDate contains a value
year = "1980";
month = "5";
day = "6";
result = DwCEventDQ.eventDateFromYearMonthDay(eventDate, year, month, day);
assertEquals(EnumDQAmendmentResultState.NOT_RUN,result.getResultState());
eventDate = ""; //
year = "1980";
month = "5";
day = "6";
result = DwCEventDQ.eventDateFromYearMonthDay(eventDate, year, month, day);
assertEquals(EnumDQAmendmentResultState.FILLED_IN,result.getResultState());
assertEquals("1980-05-06", result.getResult().get("dwc:eventDate"));
eventDate = "";
year = "1980";
month = "12";
day = "03";
result = DwCEventDQ.eventDateFromYearMonthDay(eventDate, year, month, day);
assertEquals(EnumDQAmendmentResultState.FILLED_IN,result.getResultState());
assertEquals("1980-12-03", result.getResult().get("dwc:eventDate"));
eventDate = "";
year = "1980";
month = "12";
day = "";
result = DwCEventDQ.eventDateFromYearMonthDay(eventDate, year, month, day);
assertEquals(EnumDQAmendmentResultState.FILLED_IN,result.getResultState());
assertEquals("1980-12", result.getResult().get("dwc:eventDate"));
eventDate = "";
year = "1980";
month = "";
day = "";
result = DwCEventDQ.eventDateFromYearMonthDay(eventDate, year, month, day);
assertEquals(EnumDQAmendmentResultState.FILLED_IN,result.getResultState());
assertEquals("1980", result.getResult().get("dwc:eventDate"));
eventDate = "";
year = "1640";
month = "2";
day = "05";
result = DwCEventDQ.eventDateFromYearMonthDay(eventDate, year, month, day);
assertEquals(EnumDQAmendmentResultState.FILLED_IN,result.getResultState());
assertEquals("1640-02-05", result.getResult().get("dwc:eventDate"));
eventDate = "";
year = "1931";
month = "2";
day = "31"; // no such day
result = DwCEventDQ.eventDateFromYearMonthDay(eventDate, year, month, day);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET,result.getResultState());
eventDate = "";
year = "1931";
month = "2";
day = "29"; // no such day
result = DwCEventDQ.eventDateFromYearMonthDay(eventDate, year, month, day);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET,result.getResultState());
eventDate = "";
year = "1932";
month = "2";
day = "29"; // leap day
result = DwCEventDQ.eventDateFromYearMonthDay(eventDate, year, month, day);
assertEquals(EnumDQAmendmentResultState.FILLED_IN,result.getResultState());
assertEquals("1932-02-29", result.getResult().get("dwc:eventDate"));
eventDate = "";
year = "1980";
month = "text";
day = "6";
result = DwCEventDQ.eventDateFromYearMonthDay(eventDate, year, month, day);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET,result.getResultState());
eventDate = "";
year = "";
month = "5";
day = "6";
result = DwCEventDQ.eventDateFromYearMonthDay(eventDate, year, month, day);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET,result.getResultState());
eventDate = "";
year = "1980";
month = "12";
day = "text";
result = DwCEventDQ.eventDateFromYearMonthDay(eventDate, year, month, day);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET,result.getResultState());
eventDate = "";
year = "1980";
month = "IV";
day = "6";
result = DwCEventDQ.eventDateFromYearMonthDay(eventDate, year, month, day);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET,result.getResultState());
eventDate = "";
year = ""; // no value provided for year
month = "1";
day = "6";
result = DwCEventDQ.eventDateFromYearMonthDay(eventDate, year, month, day);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET,result.getResultState());
}
@Test
public void testIsStartEndDayPossibleForYear() {
EventDQValidation result = null;
for (int year = 1900; year<=1903; year++) {
for (int day= 1; day<=365; day++) {
logger.debug(day + "-" + year);
result = DwCEventDQ.endDayOfYearInRangeForYear(Integer.toString(day), Integer.toString(year));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.COMPLIANT, result.getResult());
result = DwCEventDQ.startDayOfYearInRangeForYear(Integer.toString(day), Integer.toString(year));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.COMPLIANT, result.getResult());
}
}
// A leap year
int year = 1932;
int day = 366;
result = DwCEventDQ.endDayOfYearInRangeForYear(Integer.toString(day), Integer.toString(year));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.COMPLIANT, result.getResult());
result = DwCEventDQ.startDayOfYearInRangeForYear(Integer.toString(day), Integer.toString(year));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.COMPLIANT, result.getResult());
// not a leap year
year = 2001;
day = 366; // out of range
result = DwCEventDQ.endDayOfYearInRangeForYear(Integer.toString(day), Integer.toString(year));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
result = DwCEventDQ.startDayOfYearInRangeForYear(Integer.toString(day), Integer.toString(year));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
year = 2001;
day = 0; // out of range
result = DwCEventDQ.endDayOfYearInRangeForYear(Integer.toString(day), Integer.toString(year));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
result = DwCEventDQ.startDayOfYearInRangeForYear(Integer.toString(day), Integer.toString(year));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
year = 2001;
day = 367; // out of range
result = DwCEventDQ.endDayOfYearInRangeForYear(Integer.toString(day), Integer.toString(year));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
result = DwCEventDQ.startDayOfYearInRangeForYear(Integer.toString(day), Integer.toString(year));
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
// test with no year
day = 366;
result = DwCEventDQ.endDayOfYearInRangeForYear(Integer.toString(day),"");
assertEquals(EnumDQResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
result = DwCEventDQ.startDayOfYearInRangeForYear(Integer.toString(day),"");
assertEquals(EnumDQResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
}
@Test
public void testMonthStandardized() {
String month = "12";
EventDQAmendment result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.NO_CHANGE, result.getResultState());
month = "0";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.NO_CHANGE, result.getResultState());
month = "1414";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.NO_CHANGE, result.getResultState());
month = "";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
month = "randomtext";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
month = "Jan";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("1", result.getResult().get("dwc:month"));
month = "Jan.";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("1", result.getResult().get("dwc:month"));
month = "January";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("1", result.getResult().get("dwc:month"));
month = "JAn.";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("1", result.getResult().get("dwc:month"));
month = "Feb.";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("2", result.getResult().get("dwc:month"));
month = "Février";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("2", result.getResult().get("dwc:month"));
month = "Fevrier";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("2", result.getResult().get("dwc:month"));
month = "fevrier";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("2", result.getResult().get("dwc:month"));
month = "Febbraio";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("2", result.getResult().get("dwc:month"));
month = "Febrero";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("2", result.getResult().get("dwc:month"));
month = "Februar";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("2", result.getResult().get("dwc:month"));
month = "二";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("2", result.getResult().get("dwc:month"));
month = "i";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("1", result.getResult().get("dwc:month"));
month = "I";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("1", result.getResult().get("dwc:month"));
month = "II";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("2", result.getResult().get("dwc:month"));
month = "III";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("3", result.getResult().get("dwc:month"));
month = "IV";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("4", result.getResult().get("dwc:month"));
month = "V";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("5", result.getResult().get("dwc:month"));
month = "VI";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("6", result.getResult().get("dwc:month"));
month = "VII";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("7", result.getResult().get("dwc:month"));
month = "VIII";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("8", result.getResult().get("dwc:month"));
month = "IX";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("9", result.getResult().get("dwc:month"));
month = "X";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("10", result.getResult().get("dwc:month"));
month = "XI";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("11", result.getResult().get("dwc:month"));
month = "XII";
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("12", result.getResult().get("dwc:month"));
month = "XIII"; // no month 13
result = DwCEventDQ.standardizeMonth(month);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
}
@Test
public void testDayStandardized() {
String day = "1";
EventDQAmendment result = DwCEventDQ.standardizeDay(day);
assertEquals(EnumDQAmendmentResultState.NO_CHANGE, result.getResultState());
for (int i=2; i<32; i++) {
result = DwCEventDQ.standardizeDay(Integer.toString(i));
assertEquals(EnumDQAmendmentResultState.NO_CHANGE, result.getResultState());
}
day = "0";
result = DwCEventDQ.standardizeDay(day);
assertEquals(EnumDQAmendmentResultState.NO_CHANGE, result.getResultState());
day = "32";
result = DwCEventDQ.standardizeDay(day);
assertEquals(EnumDQAmendmentResultState.NO_CHANGE, result.getResultState());
day = "";
result = DwCEventDQ.standardizeDay(day);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
day = "Feb.";
result = DwCEventDQ.standardizeDay(day);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
day = "1st";
result = DwCEventDQ.standardizeDay(day);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("1", result.getResult().get("dwc:day"));
day = "2nd.";
result = DwCEventDQ.standardizeDay(day);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("2", result.getResult().get("dwc:day"));
day = "31st";
result = DwCEventDQ.standardizeDay(day);
assertEquals(EnumDQAmendmentResultState.CHANGED, result.getResultState());
assertEquals("31", result.getResult().get("dwc:day"));
day = "32nd";
result = DwCEventDQ.standardizeDay(day);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
day = "one";
result = DwCEventDQ.standardizeDay(day);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
day = "o1"; // typo for 01
result = DwCEventDQ.standardizeDay(day);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
day = "O1"; // typo for 01
result = DwCEventDQ.standardizeDay(day);
assertEquals(EnumDQAmendmentResultState.INTERNAL_PREREQUISITES_NOT_MET, result.getResultState());
}
@Test
public void testEventEmpty() {
EventDQValidation result = null;
String eventDate = null;
String verbatimEventDate = null;
String year = null;
String month = null;
String day = null;
String startDayOfYear = null;
String endDayOfYear = null;
String eventTime = null;
result = DwCEventDQ.eventEmpty(eventDate, verbatimEventDate, year, month, day, startDayOfYear, endDayOfYear, eventTime);
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
eventDate = "";
verbatimEventDate = "";
year = "";
month = "";
day = "";
startDayOfYear = "";
endDayOfYear = "";
eventTime = "";
result = DwCEventDQ.eventEmpty(eventDate, verbatimEventDate, year, month, day, startDayOfYear, endDayOfYear, eventTime);
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
eventDate = "";
verbatimEventDate = " ";
year = " ";
month = "NULL";
day = "\t";
startDayOfYear = "\n";
endDayOfYear = " ";
eventTime = " ";
result = DwCEventDQ.eventEmpty(eventDate, verbatimEventDate, year, month, day, startDayOfYear, endDayOfYear, eventTime);
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.NOT_COMPLIANT, result.getResult());
eventDate = "text";
verbatimEventDate = "";
year = "";
month = "";
day = "";
startDayOfYear = "";
endDayOfYear = "";
eventTime = "";
result = DwCEventDQ.eventEmpty(eventDate, verbatimEventDate, year, month, day, startDayOfYear, endDayOfYear, eventTime);
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.COMPLIANT, result.getResult());
eventDate = "";
verbatimEventDate = "";
year = "";
month = "";
day = "";
startDayOfYear = "";
endDayOfYear = "";
eventTime = "text";
result = DwCEventDQ.eventEmpty(eventDate, verbatimEventDate, year, month, day, startDayOfYear, endDayOfYear, eventTime);
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.COMPLIANT, result.getResult());
eventDate = "1880-02-03";
verbatimEventDate = "";
year = "";
month = "";
day = "";
startDayOfYear = "";
endDayOfYear = "";
eventTime = "";
result = DwCEventDQ.eventEmpty(eventDate, verbatimEventDate, year, month, day, startDayOfYear, endDayOfYear, eventTime);
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.COMPLIANT, result.getResult());
eventDate = "";
verbatimEventDate = "";
year = "";
month = "";
day = "";
startDayOfYear = "";
endDayOfYear = "";
eventTime = "14:50";
result = DwCEventDQ.eventEmpty(eventDate, verbatimEventDate, year, month, day, startDayOfYear, endDayOfYear, eventTime);
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.COMPLIANT, result.getResult());
eventDate = "";
verbatimEventDate = "";
year = "";
month = "2";
day = "4";
startDayOfYear = "";
endDayOfYear = "";
eventTime = "";
result = DwCEventDQ.eventEmpty(eventDate, verbatimEventDate, year, month, day, startDayOfYear, endDayOfYear, eventTime);
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.COMPLIANT, result.getResult());
eventDate = "";
verbatimEventDate = "";
year = "";
month = "";
day = "";
startDayOfYear = "1";
endDayOfYear = "365";
eventTime = "";
result = DwCEventDQ.eventEmpty(eventDate, verbatimEventDate, year, month, day, startDayOfYear, endDayOfYear, eventTime);
assertEquals(EnumDQResultState.RUN_HAS_RESULT, result.getResultState());
assertEquals(EnumDQValidationResult.COMPLIANT, result.getResult());
eventDate = "";