integration_tests.yml

name: Integration Tests

on:
  workflow_dispatch:
  push:
    branches:
      - 'r4/master'
  pull_request:

jobs:
  build:  
    runs-on: ubuntu-22.04
    steps:
      -
        name: Checkout repo
        uses: actions/checkout@v4
      - 
        name: Build the latest Spark Docker image
        run: docker build . --file .docker/linux/Spark.Dockerfile
          -t sparkfhir/spark:r4-latest
      - 
        name: Build the latest Mongo Docker image
        run: docker build . --file .docker/linux/Mongo.Dockerfile
          -t sparkfhir/mongo:r4-latest
      - 
        name: Run integration tests
        run: |
          cd tests/integration-tests
          mkdir -p logs html_summaries json_results
          docker-compose up -d spark
          docker-compose run --rm --no-deps plan_executor ./execute_all.sh 'http://spark:8080/fhir' r4 'html|json|stdout'
          docker-compose logs spark > logs/backend.log
      - 
        name: Combine test results
        if: ${{ always() }}
        run: cd tests/integration-tests && ./combine-test-results.sh json_results annotations.json
      - 
        name: Attach test results
        if: github.event_name != 'pull_request'
        uses: yuzutech/annotations-action@v0.5.0
        with:
          repo-token: "${{ secrets.GITHUB_TOKEN }}"
          input: tests/integration-tests/annotations.json
      - 
        name: Archive logs
        if: ${{ always() }}
        uses: actions/upload-artifact@v4
        with:
          name: logs-r4-${{ github.sha }}
          path: tests/integration-tests/logs/*.log*
      - 
        name: Archive test reports
        if: ${{ always() }}
        uses: actions/upload-artifact@v4
        with:
          name: html_summaries-r4-${{ github.sha }}
          path: tests/integration-tests/html_summaries/**/*.html
      - 
        name: Archive JSON results
        if: ${{ always() }}
        uses: actions/upload-artifact@v4
        with:
          name: json_results-r4-${{ github.sha }}
          path: tests/integration-tests/json_results/**/*.json
      - 
        name: Archive annotations file
        if: ${{ always() }}
        uses: actions/upload-artifact@v4
        with:
          name: annotations-r4-${{ github.sha }}
          path: tests/integration-tests/annotations.json
      - 
        name: Cleanup
        if: ${{ always() }}
        run: cd tests/integration-tests && docker-compose down