STAR-Fusion-1.12.0-foss-2022b.eb

# Built with EasyBuild version 3.8.1 on 2019-02-25_13-30-56
# This file is an EasyBuild reciPY as per https://github.com/easybuilders/easybuild
# Author: Pablo Escobar Lopez
# sciCORE - University of Basel
# SIB Swiss Institute of Bioinformatics
# rewrite 2023-08-07 John Dey - Fred Hutch Cancer Center - Seattle US

easyblock = 'Tarball'

name = 'STAR-Fusion'
version = '1.12.0'

homepage = 'https://github.com/STAR-Fusion/STAR-Fusion'
description = """STAR-Fusion uses the STAR aligner to identify candidate fusion transcripts
 supported by Illumina reads. STAR-Fusion further processes the output generated by the STAR aligner
 to map junction reads and spanning reads to a reference annotation set."""

toolchain = {'name': 'foss', 'version': '2022b'}

source_urls = ['https://github.com/STAR-Fusion/STAR-Fusion/releases/download/%(name)s-v%(version)s/']
sources = ['%(name)s-v%(version)s.FULL.tar.gz']
checksums = ['f99e008a69bdbd8e3cfe51a50f1a57860d4c9a30e2f4f2de80a9b32c97f50e41']

dependencies = [
    ('Perl', '5.36.0'),
    ('STAR', '2.7.10b'),
]

# Perl libraries DB_File is part of the Base install for Perl
# Perl dependencies Set::IntervalTree is statified with Perl/5.36.0-GCCcore-12.2.0

sanity_check_paths = {
    'files': ['STAR-Fusion'],
    'dirs': []
}

sanity_check_commands = ['%(name)s --version']
modextrapaths = {'PATH': ['']}

moduleclass = 'bio'