ModuleNotFoundError: No module named 'optimum_reparam'

[alejandro-ariza]

Hi, I just forked/cloned the repository and I found a module which is not listed in the dependencies. It's called "optimum_reparam" and it's imported right here. Maybe somewhere else. I failed finding the module myself, could someone provide details about this module in the README requirements section, please?

Thanks for this initiative!

[vnmabus]

This is a Cython module in https://github.com/GAA-UAM/scikit-fda/tree/develop/deps/fdasrsf.

Did you have any problems with it?

[alejandro-ariza]

I'm getting a ModuleNotFoundError when importing optimum_reparam with the Anaconda python distribution (Python 3.7.7, Cython 0.29.15), using Spyder 4.1.2.

import optimum_reparam
>>> ModuleNotFoundError: No module named 'optimum_reparam'

I managed to import optimum_reparam with Python 3.6 and Cython 0.29.16 from the terminal, but I do most of my work with Spyder! Anyone knows a workaround to install optimum_reparam with conda?

Thanks.

[vnmabus]

Which OS do you use? How have you installed the package?

[alejandro-ariza]

Ubuntu 18.04.4 LTS.

I did pip install scikit-fda but what I actually need is conda install scikit-fda, to use the package from the Anaconda python distribution (Spyder). I found that the later is not available yet so I manually added scikit-fda and all the dependencies in the PYTHONPATH (~/.bashrc). So technically, scikit-fda is not installed in the Anaconda python distribution, I just added the library path.

[vnmabus]

Even if you install it from pip, if you do it inside your conda environment it should be available to conda programs. I do not personally use Spyder, but I use Miniconda and never had a problem with that. Did you install from pip while inside your conda environment?

[alejandro-ariza]

Sweet, it works!

I had no idea you could "pip install" inside the conda environment, so that's a double win :)

I'm interested in FDA to apply in the field of oceanography. I just forked/cloned the repository to give it a go. Are you fancy guys to receive pull request if I find bugs?

[vnmabus]

Yes, of course! Feel free to open PRs and issues or to discuss them.

[alejandro-ariza]

Gracias!