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config.sh
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config.sh
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#!/bin/bash
GREEN='\033[22;32m'
RESET='\033[0m'
RED='\033[01;31m'
#module purge
string=$HOSTNAME
if [[ $string == *"comet"* ]]; then
export cluster=comet
echo $cluster
elif [[ $string == *"bridges"* ]]; then
export cluster=bridges
echo $cluster
elif [[ $string == *"stampede"* ]]; then
export cluster=stampede
echo $cluster
elif [[ $string == *"crc"* ]]; then
export cluster=crc
echo $cluster
elif [[ $string == *"titan"* ]]; then
export cluster=titan
echo $cluster
fi
printf "${RED}\n \n System is = $cluster ${RESET}\n \n"
read -p "To Configure for GPU press 1 else enter 0: " GPU
echo $GPU
if [[ $cluster == "bridges" ]]; then
#module purge
export HDF5_ROOT=/pylon5/ac561fp/hasbesta/packages/hdf5-1.8.17/
module load psc_path/1.1
module load slurm/default
module load xdusage/2.0-4
module load cmake/3.7.2
module load fftw3/3.3.4
if [ $GPU -lt 1 ]; then
module load /opt/packages/openmpi/openmpi-2.0.1/modulefiles/gcc_openmpi-2.0.1
export CXX=/opt/packages/openmpi/openmpi-2.0.1/bin/mpiCC;
export CC=/opt/packages/openmpi/openmpi-2.0.1/bin/mpicc;
export GPU1=0;
export _OPENACC=0;
else
module load mpi/pgi_openmpi.18.1
export MPI_ROOT=/opt/packages/pgi/linux86-64/2018/mpi/openmpi-2.1.2/
export CC=$MPI_ROOT/bin/mpicc;
export CXX=$MPI_ROOT/bin/mpiCC;
export GPU1=1;
export _OPENACC=1;
fi
fi
if [[ $cluster == "comet" ]]; then
module purge
export MODULEPATH=/opt/modulefiles/applications/.gnu:/opt/modulefiles/mpi/.gnu:/opt/modulefiles/mpi:/opt/modulefiles/compilers:/opt/modulefiles/applications:/usr/share/Modules/modulefiles:/etc/modulefiles:/share/apps/compute/modulefiles/mpi:
export MODULEPATH=$MODULEPATH:/share/apps/compute/modulefiles:/share/apps/compute/modulefiles/mpi:/share/apps/compute/modulefiles/applications
export MODULEPATH=$MODULEPATH:/share/apps/compute/doxygen/bin
#export MODULEPATH=/opt/modulefiles/applications/.gnu:/opt/modulefiles/mpi/.gnu:/opt/modulefiles/mpi:/opt/modulefiles/compilers:/opt/modulefiles/applications:/usr/share/Modules/modulefiles:/etc/modulefiles:/share/apps/compute/modulefiles/mpi:
#system needs
module load cmake/3.9.1
module load gnutools
module load gnu/6.2.0
#module load fftw/3.3.4
#export HDF5HOME=/opt/hdf5/intel/openmpi_ib
##module load .intel/mvapich2_ib/2.1
if [ $GPU -lt 1 ]; then
module load openmpi_ib/2.1.1_gnu
module load hdf5/1.10.2gnu
module load fftw
#module load fftw/3.3.4
#export FFTWHOME=/opt/fftw/3.3.4/gnu/openmpi_ib;
export CC=$MPIHOME/bin/mpicc
export CXX=$MPIHOME/bin/mpiCC
export GPU1=0;
export _OPENACC=0;
else
export MODULEPATH=/share/apps/gpu/pgi/v18.4/modulefiles:$MODULEPATH
module purge
module load gnubase
module load pgi/18.4
module load openmpi/2.1.2
module load hdf5/1.10.2
module load fftw
### Set FFTW manually
#export FFTWHOME=/opt/fftw/3.3.4/pgi/openmpi_ib
#export PATH=/opt/fftw/3.3.4/pgi/openmpi_ib/bin:$PATH
#export LD_LIBRARY_PATH=/opt/fftw/3.3.4/pgi/openmpi_ib/lib:$LD_LIBRARY_PATH
#export MODULEPATH=/share/apps/compute/modulefiles:$MODULEPATH
module load gnu/4.9.2
module load cmake
module cuda
#module load fftw/3.3.4
#cp /share/apps/gpu/pgi/v18.4/linux86-64/18.4/bin/localrc.comet.gcc620 ~/.mypgcpprc
export CC=$MPIHOME/bin/mpicc;
export CXX=$MPIHOME/bin/mpiCC;
export GPU1=1;
export _OPENACC=1;
fi
fi
if [[ $cluster == "stampede" ]]; then
module load intel/18.0.2 impi/18.0.2
module load phdf5/1.8.16
#export HDF5HOME=/opt/hdf5/intel/openmpi_ib
##module load .intel/mvapich2_ib/2.1
if [ $GPU -lt 1 ]; then
#module load openmpi_ib/2.0.4_gnu
module load fftw3/3.3.8
export CC=$TACC_IMPI_DIR/intel64/bin/mpicc
export CXX=$TACC_IMPI_DIR/intel64/bin/mpicxx
export GPU1=0;
else
echo "No GPU is available on Stampede"
fi
fi
if [[ $cluster == "crc" ]]; then
module purge
## module load intel/2018.2.199
## module load intel-mpi/2018.2.199
## module load gcc/6.3.0
## module load openmpi/2.0.2
## module load hdf5/1.10.0
## module load fftw/3.3.8
## module load cmake/3.7.1
module load gcc/8.2.0
module load openmpi/3.1.1
module load googletest/1.8.1
module load fftw/3.3.8-double
module load hdf5/1.10.2
if [ $GPU -lt 1 ]; then
export CC=$MPI_ROOT/bin/mpicc
export CXX=$MPI_ROOT/bin/mpiCC
export GPU1=0;
else
export GPU1=1
# module load gcc/5.4.0
# module load openmpi/2.0.2
#module load openmpi/3.1.3
# module load pgi/18.10
module load pgi/19.4
# export CC=/ihome/crc/install/pgi/18.10/linux86-64/18.10/mpi/openmpi-2.1.2/bin/mpicc
# export CXX=/ihome/crc/install/pgi/18.10/linux86-64/18.10/mpi/openmpi-2.1.2/bin/mpiCC
# export CC=/ihome/crc/install/pgi/19.4/linux86-64/2019/mpi/openmpi-3.1.1/bin/mpicc
# export CXX=/ihome/crc/install/pgi/19.4/linux86-64/2019/mpi/openmpi-3.1.1/bin/mpiCC
export CC=/ihome/crc/install/pgi/19.4/linux86-64/19.4/bin/pgcc
export CXX=/ihome/crc/install/pgi/19.4/linux86-64/19.4/bin/pgc++
fi
fi
if [[ $cluster == "titan" ]]; then
#system needs
module load cmake3
module unload PrgEnv-pgi/5.2.82
module unload PrgEnv-gnu/5.2.82
export CRAYPE_LINK_TYPE=dynamic
if [ $GPU -lt 1 ]; then
module load PrgEnv-gnu/5.2.82
module load cray-mpich/7.6.3
module load cray-hdf5-parallel
module load fftw
export GPU1=0;
else
module load PrgEnv-pgi
module swap pgi pgi/18.10.0
module load cray-mpich/7.6.3
module load cray-hdf5-parallel
module load cudatoolkit
export GPU1=1;
fi
fi
printf "${RED} Creating Required Directories ${RESET}\n \n"
if [ ! -d "./soln" ]; then
mkdir soln
fi
if [ ! -d "./build" ]; then
mkdir build
fi
printf "${GREEN} Required modules have been loaded for your system! ${RESET}\n \n"
printf "${GREEN} Change directory to buid/ and type cmake .. and make sure it finds all packages ${RESET}\n \n"
printf "${GREEN} After successful cmake, type make to compile the code. make -j n to compile in parallel with n processes ${RESET}\n \n"
################################################################
# FORMATING the SHELL SCRIPT
################################################################
#1 Load the file into Emacs "emacs config.sh"
#2 Press Ctrl-space at the top of the file
#3 Move the cursor to the bottom of the file
#4 Press Alt-X and type untabify then return
#4 Press Alt-X and type indent-region then return