plot_temp.Rd

% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/plot_temp.R
\name{plot_temp}
\alias{plot_temp}
\title{plot water temperatures from a GLM simulation}
\usage{
plot_temp(file = "output.nc", fig_path = FALSE, reference = "surface",
  col_lim, ...)
}
\arguments{
\item{file}{a string with the path to the netcdf output from GLM}

\item{fig_path}{F if plot to screen, string path if save plot as .png}

\item{reference}{a string for 'surface' or 'bottom'}

\item{col_lim}{range for heatmap (in units of the variable)}

\item{...}{additional arguments passed to \code{par()}}
}
\note{
\code{plot_temp} calls \code{\link{plot_var}} specifically for the \code{var_name = 'temp'}. 
\code{\link{plot_var}} uses the \code{\link[graphics]{layout}} function and so is restricted to a full page display.
}
\examples{
sim_folder <- run_example_sim(verbose = FALSE)
nc_file <- file.path(sim_folder, 'output.nc')
plot_temp(file = nc_file, fig_path = FALSE)
plot_temp(file = nc_file, fig_path = 'test_figure.png', height = 3, reference = 'surface')
}
\author{
Jordan S. Read, Luke A. Winslow
}
\seealso{
\code{\link{get_temp}}, \code{\link{plot_var}}
}
\keyword{methods}