Is there a way to go directly from a pd.Dataframe version of a Bed file?

[haleybianchi]

Basically the title, I am doing an analysis of various bed file like dataframes, and am wondering if I can convert them into a Frame object for plotting. I have only seen the file I/O operations using BED(), which is currently not working for me. Regardless, converting a pd.Df to a frame object would be usefule.

----> 9 BED(f"{BED_DIR}v_genes.bed") + Title("mouse IghV") +
10 BigWig(f"{BW_DIR}B6_K27ac.bw") + Title("Pro-b K27ac") +
11 prob + Title("Pro-b HiC")
13 frame.plot(TEST_RANGE)

File /data/bianchiah/mymamba/envs/mambamatrix2/lib/python3.8/site-packages/coolbox/core/track/bed/bed.py:36, in BED.init(self, file, **kwargs)
31 properties.update({
32 'file': file,
33 **kwargs
34 })
35 super().init(**properties)
---> 36 self.bgz_file = build_bed_index(file)

File /data/bianchiah/mymamba/envs/mambamatrix2/lib/python3.8/site-packages/coolbox/utilities/bed.py:406, in build_bed_index(file)
404 bgz_file = file + '.bgz'
405 log.info(f"Bgzip bed file, save to {bgz_file}")
--> 406 bgz_bed(file, bgz_file)
...
363 cmd = popenargs[0]
--> 364 raise CalledProcessError(retcode, cmd)
365 return 0