Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Use roxylint and roxytypes #174

Closed
wants to merge 7 commits into from
Closed

Use roxylint and roxytypes #174

wants to merge 7 commits into from

Conversation

danielinteractive
Copy link
Collaborator

closes #173

@github-actions
Copy link
Contributor

github-actions bot commented Jul 6, 2023 •
edited

Unit Tests Summary

    1 files    17 suites   3m 27s ⏱️
  42 tests   42 ✔️ 0 💤 0 ❌
174 runs  173 ✔️ 1 💤 0 ❌

Results for commit 9819070.

♻️ This comment has been updated with latest results.

@github-actions
Copy link
Contributor

github-actions bot commented Jul 6, 2023 •
edited

badge

Code Coverage Summary

Filename                       Stmts    Miss  Cover    Missing
---------------------------  -------  ------  -------  ---------------------
R/DataJoint.R                      8       0  100.00%
R/DataLongitudinal.R              79       1  98.73%   171
R/DataSurvival.R                  82       1  98.78%   201
R/defaults.R                      11      11  0.00%    18-111
R/generics.R                      11       1  90.91%   157
R/JointModel.R                    48       6  87.50%   83-85, 115-118
R/JointModelSamples.R             46       0  100.00%
R/Link.R                           6       0  100.00%
R/LinkGSF.R                       51      12  76.47%   107-118
R/LinkNone.R                       3       1  66.67%   36
R/LinkRandomSlope.R               10       0  100.00%
R/LongitudinalGSF.R               23       0  100.00%
R/LongitudinalModel.R             10       0  100.00%
R/LongitudinalRandomSlope.R       17       1  94.12%   48
R/LongitudinalSamples.R           15       0  100.00%
R/Parameter.R                     12       0  100.00%
R/ParameterList.R                 28       0  100.00%
R/Prior.R                         38       5  86.84%   99-103
R/simulations.R                  169       6  96.45%   172, 235-239
R/StanModel.R                      7       0  100.00%
R/StanModule.R                   123       6  95.12%   32, 179-191, 225, 236
R/SurvivalExponential.R            9       9  0.00%    31-39
R/SurvivalLoglogistic.R           10      10  0.00%    34-43
R/SurvivalModel.R                 12       0  100.00%
R/SurvivalSamples.R               43       0  100.00%
R/SurvivalWeibullPH.R             10       0  100.00%
R/utilities.R                     83       1  98.80%   14
TOTAL                            964      71  92.63%

Diff against main

Filename      Stmts    Miss  Cover
----------  -------  ------  --------
TOTAL             0       0  +100.00%

Results for commit: 89bcbeb

Minimum allowed coverage is 80%

♻️ This comment has been updated with latest results

@danielinteractive danielinteractive added this to PR Awaiting Review in Tasks via automation Jul 6, 2023
@github-actions
Copy link
Contributor

github-actions bot commented Jul 18, 2023 •
edited

badge

Code Coverage Summary

Filename                       Stmts    Miss  Cover    Missing
---------------------------  -------  ------  -------  ---------------------
R/DataJoint.R                      8       0  100.00%
R/DataLongitudinal.R              79       1  98.73%   171
R/DataSurvival.R                  82       1  98.78%   201
R/defaults.R                      11      11  0.00%    18-111
R/generics.R                      11       1  90.91%   157
R/JointModel.R                    48       6  87.50%   85-87, 118-121
R/JointModelSamples.R             46       0  100.00%
R/Link.R                           6       0  100.00%
R/LinkGSF.R                       51      12  76.47%   107-118
R/LinkNone.R                       3       1  66.67%   36
R/LinkRandomSlope.R               10       0  100.00%
R/LongitudinalGSF.R               23       0  100.00%
R/LongitudinalModel.R             10       0  100.00%
R/LongitudinalRandomSlope.R       17       1  94.12%   48
R/LongitudinalSamples.R           15       0  100.00%
R/Parameter.R                     12       0  100.00%
R/ParameterList.R                 28       0  100.00%
R/Prior.R                         38       5  86.84%   99-103
R/simulations.R                  169       6  96.45%   172, 235-239
R/StanModel.R                      7       0  100.00%
R/StanModule.R                   123       6  95.12%   32, 179-191, 225, 236
R/SurvivalExponential.R            9       9  0.00%    31-39
R/SurvivalLoglogistic.R           10      10  0.00%    34-43
R/SurvivalModel.R                 12       0  100.00%
R/SurvivalSamples.R               43       0  100.00%
R/SurvivalWeibullPH.R             10       0  100.00%
R/utilities.R                     83       1  98.80%   14
TOTAL                            964      71  92.63%

Diff against main

Filename      Stmts    Miss  Cover
----------  -------  ------  --------
TOTAL             0       0  +100.00%

Results for commit: c34541b

Minimum allowed coverage is 80%

♻️ This comment has been updated with latest results

danielinteractive
danielinteractive commented Jul 24, 2023
View reviewed changes
DESCRIPTION
list(
markdown = TRUE,
packages = c("roxylint", "roxytypes"),
roclets = c("namespace", "rd", "roxylint::roxylint")
Copy link
Collaborator Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

add collate

@gowerc
Copy link
Collaborator

gowerc commented Mar 19, 2024

@danielinteractive, given how old this is do you have any objections for me closing this PR as I imagine it would be easier to start from scratch using the aforementioned conversion function.

For reference this is now being tracked by #284

@danielinteractive
Copy link
Collaborator Author

yep let's close this

Tasks automation moved this from PR Awaiting Review to Done Mar 19, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Reviewers
No reviews
Assignees
No one assigned
Labels
None yet
Projects
Tasks
Done
Milestone
No milestone
Development

Successfully merging this pull request may close these issues.

Use roxylint and roxytypes packages to simplify documentation workflow
2 participants
@danielinteractive @gowerc