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bai file strict input #10

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KewinOgink opened this issue May 18, 2021 · 2 comments · Fixed by #14
Closed

bai file strict input #10

KewinOgink opened this issue May 18, 2021 · 2 comments · Fixed by #14
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@zhengzhenxian
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enhancement New feature or request

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@KewinOgink
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Hi, congratulations with Clair3!

Minor issue: could not run Clair3 in docker as described here as my bai file was not found. Turns out it needed to be filename.bam.bai instead of filename.bai. A suggestion would be to make that clear/allow for more bai filenames.
@aquaskyline aquaskyline added the enhancement New feature or request label May 18, 2021
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Problem noticed and will support filename.bai in the next rolling update.

@aquaskyline
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Both ".bam.bai" and ".bai" are supported in v0.1-r2. Also in the new version both ".fa.fai" and ".fai" are supported.

@aquaskyline aquaskyline linked a pull request May 23, 2021 that will close this issue
V0.1 r2 #14
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V0.1 r2 HKU-BAL/Clair3
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@aquaskyline @zhengzhenxian @KewinOgink