some problems of get_graph.py

[hbuwls]

Hello, I am a graduate student in a university. After reading your paper, I am impressed that your articles and codes are very excellent, and I want to try to learn some knowledge of drawing construction. However, due to personal ability, there are some problems in the step of get.graph.py. I would like to ask you about the./data/biomedical_data/normal_list.txt file in get_graph.py and data/biomedical_data/normal_list_BRCA.txt and data/clinical _data/staging.txt file is the name sequence file of the data set, Other in configs/GraphConstruction/BRCA_HovernetKimia_graph_constructor yml file hovernet_data_root refers to what path, I'm very sorry my my problem is a bit much, But I am very eager to study under your guidance. I hope you can spare your precious time to help me answer my questions. Thank you very much.

[howardchanth]

Hi thanks for your appreciation of our work. The lists file refer to the labels that we refer to them foe the labels when constructing the graph - such that we can perform five folded CV with balanced classes. Then hovernet root refers to the pre-trained hovernet weights, where you can download the weights from the original repo of Hovernet.