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I'm trying to use the BayesSpace package on a TENxVisiumData dataset and I noticed that the ones I tried (cancer-related datasets) are missing the array coordinates in the colData.
Despite general plotting does not require array coordinates, clustering methods like BayesSpace requires not only pxl coordinates but also array coordinates.
Is there a way to easily fix this?
Thanks
The text was updated successfully, but these errors were encountered:
I'm trying to use the
BayesSpace
package on aTENxVisiumData
dataset and I noticed that the ones I tried (cancer-related datasets) are missing the array coordinates in thecolData
.Despite general plotting does not require array coordinates, clustering methods like
BayesSpace
requires not only pxl coordinates but also array coordinates.Is there a way to easily fix this?
Thanks
The text was updated successfully, but these errors were encountered: