These R codes implement dwgLASSO algorithm from Zuo et. al.'s BMC Bioinformatics paper: Incorporating prior biological knowledge for network-based differential gene expression analysis using differentially weighted graphical LASSO (PMID: 28187708). It contains one demo (i.e., demo.R and files in Data folder) and one function.R.
I submit version 1.0 which contains one demo (i.e., demo.R and files in Data folder) and one function.R.
- demo.R implements the proposed dwgLASSO algorithm in BMC Bioinformatics paper using microarray data.
- function.R implements three helper functions that are used in demo.R.