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Not able to install Xmipp #748

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aplearnercc opened this issue Nov 23, 2023 · 2 comments
Closed

Not able to install Xmipp #748

aplearnercc opened this issue Nov 23, 2023 · 2 comments
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help wanted Extra attention is needed

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@aplearnercc
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aplearnercc commented Nov 23, 2023

error_commandprompt
xmipp_config
Hi All,

I am trying to install Scipion and Xmipp in our cluster environment but facing issue from few weeks. Although Scipion is getting installed successfully but Xmipp is failing with error failed to install googletest dependence but in compile log error says compiler greater than equal to c++14 is required . I need help as this software is very important for us.

1: I am doing it in conda environment.
2. Scipion getting installed but Xmipp failing
3. OS: centos 7.9.2
4. conda version:23.5.2
5. compile logs attached for reference
6. Scipion version I am trying to install:3.0.0
7. gcc version :10.4.0
8. cuda:11.0.3
9. oepnmpi:4.1.0
10. xmipp config file and error screenshot attached for reference
compileLOG.txt

@albertmena
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Hi @aplearnercc and sorry for the long waitting.
As you going to install xmipp to be used inside Scipion the best way to install it is running:

scipion3 run ./xmipp
scipion3 installp -p path/to/scipion-em-xmipp

Are you sure the default gcc version of your system is 10.4.0? you can run gcc --version and g++ --version

@albertmena albertmena added the help wanted Extra attention is needed label Jan 10, 2024
@albertmena
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More details about the issue here:
I2PC/xmipp#817

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