example.rst

Examples

The following examples cover typical use cases and should help get a better idea of how to use this package:

example/rosenbrock.ipynb example/conversion_reaction.ipynb example/fixed_parameters.ipynb example/amici_import.ipynb example/petab_import.ipynb example/store.ipynb example/sampler_study.ipynb example/sampling_diagnostics.ipynb example/prior_definition.ipynb

Download the examples as notebooks

• Rosenbrock <example/rosenbrock.ipynb>
• Conversion reaction <example/conversion_reaction.ipynb>
• Fixed parameters <example/fixed_parameters.ipynb>
• Boehm model <example/amici_import.ipynb>
• Petab import <example/petab_import.ipynb>
• Storage <example/store.ipynb>
• Sampler study <example/sampler_study.ipynb>
• Sampling diagnostics <example/sampling_diagnostics.ipynb>
• Prior definition <example/prior_definition.ipynb>

Note

Some of the notebooks have extra dependencies.