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Problem running neurosimulation (s4l api) #799

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elisabettai opened this issue Dec 12, 2022 · 3 comments
Closed

Problem running neurosimulation (s4l api) #799

elisabettai opened this issue Dec 12, 2022 · 3 comments
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Feedback Feedback through frontend S4L:web S4L on the web/ in the cloud type:bug Issue that prevents to perform a certain task, features that don't work as t

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@elisabettai
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I'm encountering an unexpected error running a Neuro simulation on osparc.io

Issue created from a Mattermost message by @newton.

@elisabettai elisabettai added type:bug Issue that prevents to perform a certain task, features that don't work as t S4L:web S4L on the web/ in the cloud labels Dec 12, 2022
@elisabettai elisabettai added this to the Zefram Cochrane milestone Dec 12, 2022
@elisabettai
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@mguidon, please close when resolved and briefly mention what was the problem (move to another repo if more appropriate).

@mguidon
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mguidon commented Dec 12, 2022

Log says

Document produced by Sim4Life version 7.1.0.0
[Info]  Document produced by Sim4Life version 7.1.0.0
Simulation : [Error] Failed to copy temporary input file to project folder location.
Warning: Unable to write to solver's input file of 'Neuronal Dynamics'. File simulation data seems to have errors (see other messages). To restore the file, reset and create the discretization again. Aborting operation.
Error: Unable to write input file.
[Warn]  Unable to write to solver's input file of 'Neuronal Dynamics'. File simulation data seems to have errors (see other messages). To restore the file, reset and create the discretization again. Aborting operation.

@elisabettai elisabettai added the Feedback Feedback through frontend label Dec 12, 2022
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Solved by adding:
os.environ["TMPDIR"]="/home/jovyan/work/workspace/temp before WriteInputFile

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Labels
Feedback Feedback through frontend S4L:web S4L on the web/ in the cloud type:bug Issue that prevents to perform a certain task, features that don't work as t
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