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paraview_incompact3d.f90
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paraview_incompact3d.f90
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program visu_paraview
implicit none
integer(4) :: nx,ny,nz,ialm,iadm,ivirt,jles,ibuoyancy,isnapshot,iprec,itripping
real(4) :: xlx,yly,zlz,dt,dx,dy,dz
integer(4) :: nfiles, icrfile, file1, filen, ifile, isnap, snap1,snapn,dig1, dig2, dig3, dig4
real(4), allocatable :: yp(:),y1(:),y3(:)
integer(4) :: i, j, k, num, aig, ii, nfil,istret,nclx, ncly, nclz, meanfil, snapfil
integer(4) :: imin,imax,jmin,jmax,kmin,kmax,snapx,snapy,snapz
integer :: ErrFlag, nargin, FNLength, status, DecInd,dynhypvisc
logical :: back
character(len=80) :: InputFN, FNBase
character(4) :: chits
NAMELIST/PostProcess/nx,ny,nz,xlx,yly,zlz,nclx,ncly,nclz,istret,nfiles,file1,filen,ialm,iadm,ivirt,jles,ibuoyancy,dynhypvisc,&
itripping,isnapshot,imin,imax,jmin,jmax,kmin,kmax,snap1,snapn,iprec
!==========================================================================
! Handle Input file
nargin=command_argument_count()
if (nargin <1) then
write(6,*) 'Please call the program with the name of the input file on the command line Ex. visualise input.pprc'
stop
endif
call get_command_argument(1,InputFN,FNLength,status)
back=.true.
FNBase=inputFN((index(InputFN,'/',back)+1):len(InputFN))
DecInd=index(FNBase,'.',back)
if (DecInd >1) then
FNBase=FNBase(1:(DecInd-1))
end if
!===========================================================================
iprec=8
open(10,file=InputFN)
read(10,nml=PostProcess)
close(10)
if (nclx==0) dx=xlx/nx
if (nclx==1 .or. nclx==2) dx=xlx/(nx-1.)
if (ncly==0) dy=yly/ny
if (ncly==1.or.ncly==2) dy =yly/(ny-1.)
if (nclz==0) dz=zlz/nz
if (nclz==1.or.nclz==2) dz=zlz/(nz-1.)
dt=1.
allocate(y1(nx))
allocate(yp(ny))
allocate(y3(nz))
do i=1,nx
y1(i)=(i-1)*dx
enddo
if (istret>1) then
print *,'We need to read the yp.dat file'
open(12,file='yp.dat',form='formatted',status='unknown')
do j=1,ny
read(12,*) yp(j)
enddo
close(12)
else
do j=1,ny
yp(j)=(j-1)*dy
enddo
endif
do k=1,nz
y3(k)=(k-1)*dz
enddo
nfil=41
open(nfil,file='visu.xdmf')
write(nfil,'(A22)')'<?xml version="1.0" ?>'
write(nfil,*)'<!DOCTYPE Xdmf SYSTEM "Xdmf.dtd" []>'
write(nfil,*)'<Xdmf xmlns:xi="http://www.w3.org/2001/XInclude" Version="2.0">'
write(nfil,*)'<Domain>'
write(nfil,*)' <Topology name="topo" TopologyType="3DCoRectMesh"'
write(nfil,*)' Dimensions="',nz,ny,nx,'">'
write(nfil,*)' Dimensions="',nz,ny,nx,'">'
write(nfil,*)' </Topology>'
write(nfil,*)' <Geometry name="geo" Type="ORIGIN_DXDYDZ">'
write(nfil,*)' <!-- Origin -->'
write(nfil,*)' <DataItem Format="XML" Dimensions="3">'
write(nfil,*)' 0.0 0.0 0.0'
write(nfil,*)' </DataItem>'
write(nfil,*)' <!-- DxDyDz -->'
write(nfil,*)' <DataItem Format="XML" Dimensions="3">'
write(nfil,*)' ',dz,dy,dx
write(nfil,*)' </DataItem>'
write(nfil,*)' </Geometry>'
write(nfil,'(/)')
write(nfil,*)' <Grid Name="TimeSeries" GridType="Collection" CollectionType="Temporal">'
write(nfil,*)' <Time TimeType="HyperSlab">'
write(nfil,*)' <DataItem Format="XML" NumberType="Float" Dimensions="3">'
write(nfil,*)' <!--Start, Stride, Count-->'
write(nfil,*)' 0.0',dt
write(nfil,*)' </DataItem>'
write(nfil,*)' </Time>'
do ifile = file1, filen
!IF THE DATA ARE STORED WITH 4 DIGITS, IE UX0001,UX0002,ETC.
dig1 = ifile/1000 + 48
dig2 = (ifile - 1000*( ifile/1000 ) )/100 + 48
dig3 = (ifile - 100*( ifile/100 ) )/10 + 48
dig4 = (ifile - 10*( ifile/10 ) )/1 + 48
chits(1:4) = char(dig1)//char(dig2)//char(dig3)//char(dig4)
!IF THE DATA ARE STORED WITH 3 DIGITS, IE UX001,UX002,ETC.
! dig1 = ifile/100 + 48
! dig2 = ( ifile - 100*( ifile/100 ) )/10 + 48
! dig3 = ( ifile - 10*( ifile/10 ) )/1 + 48
! chits(1:3) = char(dig1)//char(dig2)//char(dig3)
write(*,*) ifile, 'file'//chits
write(nfil,'(/)')
write(nfil,*)' <Grid Name="'//chits//'" GridType="Uniform">'
write(nfil,*)' <Topology Reference="/Xdmf/Domain/Topology[1]"/>'
write(nfil,*)' <Geometry Reference="/Xdmf/Domain/Geometry[1]"/>'
!SINGLE PRECISION-->Precision=4
!DOUBLE PRECISION-->Precision=8
write(nfil,*)' <Attribute Name="ux" Center="Node">'
write(nfil,*)' <DataItem Format="Binary" '
write(nfil,*)' DataType="Float" Precision="',iprec,'" Endian="little"'
write(nfil,*)' Dimensions="',nz,ny,nx,'">'
write(nfil,*)' ux'//chits
write(nfil,*)' </DataItem>'
write(nfil,*)' </Attribute>'
write(nfil,*)' <Attribute Name="uy" Center="Node">'
write(nfil,*)' <DataItem Format="Binary" '
write(nfil,*)' DataType="Float" Precision="',iprec,'" Endian="little"'
write(nfil,*)' Dimensions="',nz,ny,nx,'">'
write(nfil,*)' uy'//chits
write(nfil,*)' </DataItem>'
write(nfil,*)' </Attribute>'
write(nfil,*)' <Attribute Name="uz" Center="Node">'
write(nfil,*)' <DataItem Format="Binary" '
write(nfil,*)' DataType="Float" Precision="',iprec,'" Endian="little"'
write(nfil,*)' Dimensions="',nz,ny,nx,'">'
write(nfil,*)' uz'//chits
write(nfil,*)' </DataItem>'
write(nfil,*)' </Attribute>'
write(nfil,*)' <Attribute Name="pp" Center="Node">'
write(nfil,*)' <DataItem Format="Binary" '
write(nfil,*)' DataType="Float" Precision="',iprec,'" Endian="little"'
write(nfil,*)' Dimensions="',nz,ny,nx,'">'
write(nfil,*)' pp'//chits
write(nfil,*)' </DataItem>'
write(nfil,*)' </Attribute>'
write(nfil,*)' <Attribute Name="vort" Center="Node">'
write(nfil,*)' <DataItem Format="Binary" '
write(nfil,*)' DataType="Float" Precision="',iprec,'" Endian="little"'
write(nfil,*)' Dimensions="',nz,ny,nx,'">'
write(nfil,*)' vort'//chits
write(nfil,*)' </DataItem>'
write(nfil,*)' </Attribute>'
if(iadm==1) then
write(nfil,*)' <Attribute Name="gammadisc" Center="Node">'
write(nfil,*)' <DataItem Format="Binary" '
write(nfil,*)' DataType="Float" Precision="',iprec,'" Endian="little"'
write(nfil,*)' Dimensions="',nz,ny,nx,'">'
write(nfil,*)' gammadisc'//chits
write(nfil,*)' </DataItem>'
write(nfil,*)' </Attribute>'
endif
if(ialm==1) then
write(nfil,*)' <Attribute Name="Ftx" Center="Node">'
write(nfil,*)' <DataItem Format="Binary" '
write(nfil,*)' DataType="Float" Precision="',iprec,'" Endian="little"'
write(nfil,*)' Dimensions="',nz,ny,nx,'">'
write(nfil,*)' Ftx'//chits
write(nfil,*)' </DataItem>'
write(nfil,*)' </Attribute>'
write(nfil,*)' <Attribute Name="Fty" Center="Node">'
write(nfil,*)' <DataItem Format="Binary" '
write(nfil,*)' DataType="Float" Precision="',iprec,'" Endian="little"'
write(nfil,*)' Dimensions="',nz,ny,nx,'">'
write(nfil,*)' Fty'//chits
write(nfil,*)' </DataItem>'
write(nfil,*)' </Attribute>'
write(nfil,*)' <Attribute Name="Ftz" Center="Node">'
write(nfil,*)' <DataItem Format="Binary" '
write(nfil,*)' DataType="Float" Precision="',iprec,'" Endian="little"'
write(nfil,*)' Dimensions="',nz,ny,nx,'">'
write(nfil,*)' Ftz'//chits
write(nfil,*)' </DataItem>'
write(nfil,*)' </Attribute>'
endif
if(itripping==1.or.itripping==2) then
write(nfil,*)' <Attribute Name="Ftrip" Center="Node">'
write(nfil,*)' <DataItem Format="Binary" '
write(nfil,*)' DataType="Float" Precision="',iprec,'" Endian="little"'
write(nfil,*)' Dimensions="',nz,ny,nx,'">'
write(nfil,*)' Ftrip'//chits
write(nfil,*)' </DataItem>'
write(nfil,*)' </Attribute>'
endif
if(jles.eq.1.and.dynhypvisc.eq.1) then
write(nfil,*)' <Attribute Name="dynvisc" Center="Node">'
write(nfil,*)' <DataItem Format="Binary" '
write(nfil,*)' DataType="Float" Precision="',iprec,'" Endian="little"'
write(nfil,*)' Dimensions="',nz,ny,nx,'">'
write(nfil,*)' dynvisc'//chits
write(nfil,*)' </DataItem>'
write(nfil,*)' </Attribute>'
endif
if(ibuoyancy==1) then
write(nfil,*)' <Attribute Name="temp" Center="Node">'
write(nfil,*)' <DataItem Format="Binary" '
write(nfil,*)' DataType="Float" Precision="',iprec,'" Endian="little"'
write(nfil,*)' Dimensions="',nz,ny,nx,'">'
write(nfil,*)' temp'//chits
write(nfil,*)' </DataItem>'
write(nfil,*)' </Attribute>'
endif
if(ivirt>0) then
write(nfil,*)' <Attribute Name="IBM" Center="Node">'
write(nfil,*)' <DataItem Format="Binary" '
write(nfil,*)' DataType="Float" Precision="',iprec,'" Endian="little"'
write(nfil,*)' Dimensions="',nz,ny,nx,'">'
write(nfil,*)' IBM'//chits
write(nfil,*)' </DataItem>'
write(nfil,*)' </Attribute>'
endif
write(nfil,*)' </Grid>'
enddo
write(nfil,'(/)')
write(nfil,*)' </Grid>'
write(nfil,*)'</Domain>'
write(nfil,'(A7)')'</Xdmf>'
close(nfil)
if (isnapshot==1) then
snapfil=31
snapz=kmax-kmin+1
snapy=jmax-jmin+1
snapx=imax-imin+1
open(snapfil,file='visu_snap.xdmf')
write(snapfil,'(A22)')'<?xml version="1.0" ?>'
write(snapfil,*)'<!DOCTYPE Xdmf SYSTEM "Xdmf.dtd" []>'
write(snapfil,*)'<Xdmf xmlns:xi="http://www.w3.org/2001/XInclude" Version="2.0">'
write(snapfil,*)'<Domain>'
write(snapfil,*)' <Topology name="topo" TopologyType="3DCoRectMesh"'
write(snapfil,*)' Dimensions="',snapz,snapy,snapx,'">'
write(snapfil,*)' Dimensions="',snapz,snapy,snapx,'">'
write(snapfil,*)' </Topology>'
write(snapfil,*)' <Geometry name="geo" Type="ORIGIN_DXDYDZ">'
write(snapfil,*)' <!-- Origin -->'
write(snapfil,*)' <DataItem Format="XML" Dimensions="3">'
write(snapfil,*)' 0.0 0.0 0.0'
write(snapfil,*)' </DataItem>'
write(snapfil,*)' <!-- DxDyDz -->'
write(snapfil,*)' <DataItem Format="XML" Dimensions="3">'
write(snapfil,*)' ',dz,dy,dx
write(snapfil,*)' </DataItem>'
write(snapfil,*)' </Geometry>'
write(snapfil,'(/)')
write(snapfil,*)' <Grid Name="TimeSeries" GridType="Collection" CollectionType="Temporal">'
write(snapfil,*)' <Time TimeType="HyperSlab">'
write(snapfil,*)' <DataItem Format="XML" NumberType="Float" Dimensions="3">'
write(snapfil,*)' <!--Start, Stride, Count-->'
write(snapfil,*)' 0.0',dt
write(snapfil,*)' </DataItem>'
write(snapfil,*)' </Time>'
do isnap = snap1, snapn
!IF THE DATA ARE STORED WITH 4 DIGITS, IE UX0001,UX0002,ETC.
dig1 = isnap/1000 + 48
dig2 = ( isnap - 1000*( isnap/1000 ) )/100 + 48
dig3 = ( isnap - 100*( isnap/100 ) )/10 + 48
dig4 = ( isnap - 10*( isnap/10 ) )/1 + 48
chits(1:4) = char(dig1)//char(dig2)//char(dig3)//char(dig4)
!IF THE DATA ARE STORED WITH 3 DIGITS, IE UX001,UX002,ETC.
! dig1 = ifile/100 + 48
! dig2 = ( ifile - 100*( ifile/100 ) )/10 + 48
! dig3 = ( ifile - 10*( ifile/10 ) )/1 + 48
! chits(1:3) = char(dig1)//char(dig2)//char(dig3)
write(*,*) isnap, 'file'//chits
write(snapfil,'(/)')
write(snapfil,*)' <Grid Name="'//chits//'" GridType="Uniform">'
write(snapfil,*)' <Topology Reference="/Xdmf/Domain/Topology[1]"/>'
write(snapfil,*)' <Geometry Reference="/Xdmf/Domain/Geometry[1]"/>'
!SINGLE PRECISION-->Precision=4
!DOUBLE PRECISION-->Precision=8
write(snapfil,*)' <Attribute Name="snap_ux" Center="Node">'
write(snapfil,*)' <DataItem Format="Binary" '
write(snapfil,*)' DataType="Float" Precision="8" Endian="little"'
write(snapfil,*)' Dimensions="',snapz,snapy,snapx,'">'
write(snapfil,*)' snap_ux'//chits
write(snapfil,*)' </DataItem>'
write(snapfil,*)' </Attribute>'
write(snapfil,*)' <Attribute Name="snap_uy" Center="Node">'
write(snapfil,*)' <DataItem Format="Binary" '
write(snapfil,*)' DataType="Float" Precision="8" Endian="little"'
write(snapfil,*)' Dimensions="',snapz,snapy,snapx,'">'
write(snapfil,*)' snap_uy'//chits
write(snapfil,*)' </DataItem>'
write(snapfil,*)' </Attribute>'
write(snapfil,*)' <Attribute Name="snap_uz" Center="Node">'
write(snapfil,*)' <DataItem Format="Binary" '
write(snapfil,*)' DataType="Float" Precision="8" Endian="little"'
write(snapfil,*)' Dimensions="',snapz,snapy,snapx,'">'
write(snapfil,*)' snap_uz'//chits
write(snapfil,*)' </DataItem>'
write(snapfil,*)' </Attribute>'
write(snapfil,*)' </Grid>'
enddo
write(snapfil,'(/)')
write(snapfil,*)' </Grid>'
write(snapfil,*)'</Domain>'
write(snapfil,'(A7)')'</Xdmf>'
close(snapfil)
endif
meanfil=51
open(meanfil,file='visu_mean.xdmf')
write(meanfil,'(A22)')'<?xml version="1.0" ?>'
write(meanfil,*)'<!DOCTYPE Xdmf SYSTEM "Xdmf.dtd" []>'
write(meanfil,*)'<Xdmf xmlns:xi="http://www.w3.org/2001/XInclude" Version="2.0">'
write(meanfil,*)'<Domain>'
write(meanfil,*)' <Topology name="topo" TopologyType="3DRectMesh"'
write(meanfil,*)' Dimensions="',nz,ny,nx,'">'
write(meanfil,*)' </Topology>'
write(meanfil,*)' <Geometry name="geo" Type="VXVYVZ">'
write(meanfil,*)' <DataItem Dimensions="',nx,'" NumberType="Float" Precision="8" Format="XML">'
write(meanfil,*)' ',y1(:)
write(meanfil,*)' </DataItem>'
write(meanfil,*)' <DataItem Dimensions="',ny,'" NumberType="Float" Precision="8" Format="XML">'
write(meanfil,*)' ',yp(:)
write(meanfil,*)' </DataItem>'
write(meanfil,*)' <DataItem Dimensions="',nz,'" NumberType="Float" Precision="8" Format="XML">'
write(meanfil,*)' ',y3(:)
write(meanfil,*)' </DataItem>'
write(meanfil,*)' </Geometry>'
write(meanfil,'(/)')
write(meanfil,*)' <Grid Name="TimeSeries" GridType="Collection" CollectionType="Temporal">'
write(meanfil,*)' <Time TimeType="HyperSlab">'
write(meanfil,*)' <DataItem Format="XML" NumberType="Float" Dimensions="3">'
write(meanfil,*)' <!--Start, Stride, Count-->'
write(meanfil,*)' 0.0',dt
write(meanfil,*)' </DataItem>'
write(meanfil,*)' </Time>'
write(*,*) 'writing mean variables', meanfil
write(meanfil,'(/)')
write(meanfil,*)' <Grid Name="'//chits//'" GridType="Uniform">'
write(meanfil,*)' <Topology Reference="/Xdmf/Domain/Topology[1]"/>'
write(meanfil,*)' <Geometry Reference="/Xdmf/Domain/Geometry[1]"/>'
write(meanfil,*)' <Attribute Name="umean" Center="Node">'
write(meanfil,*)' <DataItem Format="Binary" '
write(meanfil,*)' DataType="Float" Precision="8" Endian="little"'
write(meanfil,*)' Dimensions="',nz,ny,nx,'">'
write(meanfil,*)' umean.dat'
write(meanfil,*)' </DataItem>'
write(meanfil,*)' </Attribute>'
write(meanfil,*)' <Attribute Name="vmean" Center="Node">'
write(meanfil,*)' <DataItem Format="Binary" '
write(meanfil,*)' DataType="Float" Precision="8" Endian="little"'
write(meanfil,*)' Dimensions="',nz,ny,nx,'">'
write(meanfil,*)' vmean.dat'
write(meanfil,*)' </DataItem>'
write(meanfil,*)' </Attribute>'
write(meanfil,*)' <Attribute Name="wmean" Center="Node">'
write(meanfil,*)' <DataItem Format="Binary" '
write(meanfil,*)' DataType="Float" Precision="8" Endian="little"'
write(meanfil,*)' Dimensions="',nz,ny,nx,'">'
write(meanfil,*)' wmean.dat'
write(meanfil,*)' </DataItem>'
write(meanfil,*)' </Attribute>'
write(meanfil,*)' <Attribute Name="uumean" Center="Node">'
write(meanfil,*)' <DataItem Format="Binary" '
write(meanfil,*)' DataType="Float" Precision="8" Endian="little"'
write(meanfil,*)' Dimensions="',nz,ny,nx,'">'
write(meanfil,*)' uumean.dat'
write(meanfil,*)' </DataItem>'
write(meanfil,*)' </Attribute>'
write(meanfil,*)' <Attribute Name="vvmean" Center="Node">'
write(meanfil,*)' <DataItem Format="Binary" '
write(meanfil,*)' DataType="Float" Precision="8" Endian="little"'
write(meanfil,*)' Dimensions="',nz,ny,nx,'">'
write(meanfil,*)' vvmean.dat'
write(meanfil,*)' </DataItem>'
write(meanfil,*)' </Attribute>'
write(meanfil,*)' <Attribute Name="wwmean" Center="Node">'
write(meanfil,*)' <DataItem Format="Binary" '
write(meanfil,*)' DataType="Float" Precision="8" Endian="little"'
write(meanfil,*)' Dimensions="',nz,ny,nx,'">'
write(meanfil,*)' wwmean.dat'
write(meanfil,*)' </DataItem>'
write(meanfil,*)' </Attribute>'
write(meanfil,*)' <Attribute Name="uvmean" Center="Node">'
write(meanfil,*)' <DataItem Format="Binary" '
write(meanfil,*)' DataType="Float" Precision="8" Endian="little"'
write(meanfil,*)' Dimensions="',nz,ny,nx,'">'
write(meanfil,*)' uvmean.dat'
write(meanfil,*)' </DataItem>'
write(meanfil,*)' </Attribute>'
write(meanfil,*)' <Attribute Name="uwmean" Center="Node">'
write(meanfil,*)' <DataItem Format="Binary" '
write(meanfil,*)' DataType="Float" Precision="8" Endian="little"'
write(meanfil,*)' Dimensions="',nz,ny,nx,'">'
write(meanfil,*)' uwmean.dat'
write(meanfil,*)' </DataItem>'
write(meanfil,*)' </Attribute>'
write(meanfil,*)' <Attribute Name="vwmean" Center="Node">'
write(meanfil,*)' <DataItem Format="Binary" '
write(meanfil,*)' DataType="Float" Precision="8" Endian="little"'
write(meanfil,*)' Dimensions="',nz,ny,nx,'">'
write(meanfil,*)' vwmean.dat'
write(meanfil,*)' </DataItem>'
write(meanfil,*)' </Attribute>'
if(jLES.ge.2) then
write(meanfil,*)' <Attribute Name="tauxymean" Center="Node">'
write(meanfil,*)' <DataItem Format="Binary" '
write(meanfil,*)' DataType="Float" Precision="8" Endian="little"'
write(meanfil,*)' Dimensions="',nz,ny,nx,'">'
write(meanfil,*)' vwmean.dat'
write(meanfil,*)' </DataItem>'
write(meanfil,*)' </Attribute>'
write(meanfil,*)' </Grid>'
endif
write(meanfil,'(/)')
write(meanfil,*)' </Grid>'
write(meanfil,*)'</Domain>'
write(meanfil,'(A7)')'</Xdmf>'
close(meanfil)
end program visu_paraview