Here are version 1.0 of Shiny App written for myDNA R package.
Minimal app allows you to import subset of your genome (I currently imported 10K rows ).
- It overlaps your genome with GWAS Catalog.
- It returns positions in your genome that overlap GWASCatalog entries, and provide additional information.
For example,
- You can download the results of an overlap with GWAS Catalog as a .csv file.
Currently, shiny app can be used only locally on your computer.
Step 1 Download and save ui.R and server.R scripts on your computer Step 2 Open R and set the working directory to correspond to the folder where ui.R and server.R scripts are stored (absolute filepath) Step 3 Run shiny::runApp()
*For example, I runned following lines:
setwd("D:/Projects_Helping/myDNA/myDNAS/myDNA_shinyApp/myDNA_shinyApp/") shiny::runApp()