A Python library that integrates flexible feature arithmetic with sequences and arbitrarily nested coordinate systems.
These core data models are then built upon to build in-memory representations of genomic intervals, including genes, transcripts and non-coding features.
These data structures can be parsed from GenBank and GFF3, and exported to GenBank, GFF3 and BED.
paradigm.rst vignettes.ipynb instantiating_objects.ipynb location_operations.ipynb sequence_operations.ipynb parent_operations.ipynb
annotation_data_structures.rst object_model.rst file_parsing.md parsing_genbank.ipynb parsing_gff3.ipynb parsing_variants.ipynb exporting_to_files.ipynb annotation_collections.ipynb
genindexmodindexsearch