Merge pull request #526 from fbudin69500/improve_wrapping

Improve Python wrapping

Modules/Segmentation/SignedDistanceFunction/wrapping/test/CMakeLists.txt

@@ -1 +1,2 @@
-itk_python_expression_add_test(NAME itkPCAShapeSignedDistanceFunctionPythonTest EXPRESSION "itkPCAShapeSignedDistanceFunction = itk.PCAShapeSignedDistanceFunction.New()")
+itk_python_add_test(NAME itkPCAShapeSignedDistanceFunctionPythonTest
+    COMMAND itkPCAShapeSignedDistanceFunction.py)

Modules/Segmentation/SignedDistanceFunction/wrapping/test/itkPCAShapeSignedDistanceFunction.py

@@ -0,0 +1,38 @@
+#==========================================================================
+#
+#   Copyright Insight Software Consortium
+#
+#   Licensed under the Apache License, Version 2.0 (the "License");
+#   you may not use this file except in compliance with the License.
+#   You may obtain a copy of the License at
+#
+#          http://www.apache.org/licenses/LICENSE-2.0.txt
+#
+#   Unless required by applicable law or agreed to in writing, software
+#   distributed under the License is distributed on an "AS IS" BASIS,
+#   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+#   See the License for the specific language governing permissions and
+#   limitations under the License.
+#
+#==========================================================================*/
+
+
+import itk
+from sys import argv
+itk.auto_progress(2)
+
+dim = 2
+IType = itk.Image[itk.F, dim]
+
+pca_function = itk.PCAShapeSignedDistanceFunction[itk.D, dim, IType].New()
+im = IType.New()
+im.SetRegions([10,10])
+im.Allocate()
+l = [im, im]
+# Test that it is possible to use a list of image
+pca_function.SetPrincipalComponentImages (l)
+# Test that it is possible to use an std::vector of image
+vec = itk.vector[IType]()
+vec.push_back(im)
+vec.push_back(im)
+pca_function.SetPrincipalComponentImages(vec)

Wrapping/Generators/Python/CMakeLists.txt

@@ -833,6 +833,21 @@ macro(itk_wrap_simple_type_python wrap_class swig_name)
     ADD_PYTHON_CONFIG_TEMPLATE("vector" "std::vector" "vector${swig_name}" "${cpp_name}< ${template_params} >")
   endif()
 
+  if("${cpp_name}" STREQUAL "itk::Image" AND NOT "${swig_name}" MATCHES "Pointer$")
+    set(ITK_WRAP_PYTHON_SWIG_EXT "${ITK_WRAP_PYTHON_SWIG_EXT}DECL_PYTHON_STD_VEC_RAW_TO_SMARTPTR_TYPEMAP(${swig_name}, ${swig_name}_Pointer)\n")
+    set(ITK_WRAP_PYTHON_SWIG_EXT "${ITK_WRAP_PYTHON_SWIG_EXT}%template(vector${swig_name}) std::vector< ${swig_name}_Pointer >;\n")
+    ADD_PYTHON_CONFIG_TEMPLATE("vector" "std::vector" "vector${swig_name}" "${cpp_name}< ${template_params} > ")
+  endif()
+
+  if("${cpp_name}" STREQUAL "itk::PCAShapeSignedDistanceFunction" AND NOT "${swig_name}" MATCHES "Pointer$")
+
+    set(import_text "%include ${WRAPPER_MASTER_INDEX_OUTPUT_DIR}/python/itkImage_ext.i\n")
+    string(FIND ${ITK_WRAP_PYTHON_SWIG_EXT} ${import_text} pos)
+    if(${pos} EQUAL -1)
+        set(ITK_WRAP_PYTHON_SWIG_EXT "${import_text}${ITK_WRAP_PYTHON_SWIG_EXT}")
+    endif()
+  endif()
+
 
   if("${cpp_name}" STREQUAL "itk::Index")
     ADD_PYTHON_SEQ_TYPEMAP("${swig_name}" "${template_params}")

Wrapping/Generators/Python/PyBase/pyBase.i

@@ -765,6 +765,54 @@ str = str
 
 %enddef
 
+
+%define DECL_PYTHON_STD_VEC_RAW_TO_SMARTPTR_TYPEMAP(swig_name, swig_name_ptr)
+
+   %typemap(in) std::vector< swig_name_ptr >::value_type const & (swig_name_ptr smart_ptr) {
+      swig_name * img;
+      if( SWIG_ConvertPtr($input,(void **)(&img),$descriptor(swig_name *), 0) == 0 )
+        {
+        smart_ptr = img;
+        $1 = &smart_ptr;
+        }
+      else
+        {
+        PyErr_SetString(PyExc_TypeError, "Expecting argument of type " #swig_name ".");
+        SWIG_fail;
+        }
+    }
+
+    %typemap(in) std::vector<swig_name_ptr> (std::vector< swig_name_ptr> vec_smartptr,
+                                             std::vector< swig_name_ptr> *vec_smartptr_ptr) {
+        if ((SWIG_ConvertPtr($input,(void **)(&vec_smartptr_ptr),$descriptor(std::vector<swig_name_ptr> *), 0)) == -1) {
+            PyErr_Clear();
+            if (PySequence_Check($input)) {
+                for (Py_ssize_t i =0; i < PyObject_Length($input); i++) {
+                    PyObject *o = PySequence_GetItem($input,i);
+                    swig_name * raw_ptr;
+                    if(SWIG_ConvertPtr(o,(void **)(&raw_ptr),$descriptor(swig_name *), 0) == 0) {
+                        vec_smartptr.push_back(raw_ptr);
+                    } else {
+                        PyErr_SetString(PyExc_ValueError,"Expecting a sequence of raw pointers (" #swig_name ")." );
+                        SWIG_fail;
+                    }
+                }
+                $1 = vec_smartptr;
+            }
+            else {
+                PyErr_SetString(PyExc_ValueError,"Expecting a sequence of raw pointers (" #swig_name ") or a std::vector of SmartPointers (" #swig_name_ptr ").");
+                SWIG_fail;
+            }
+        } else if( vec_smartptr_ptr != NULL ) {
+            $1 = *vec_smartptr_ptr;
+        } else {
+            PyErr_SetString(PyExc_ValueError, "Value can't be None");
+            SWIG_fail;
+        }
+    }
+%enddef
+
+
 // some code from stl
 
 %template(mapULD)         std::map< unsigned long, double >;