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general.yaml
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general.yaml
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analysis:
n_cores: 1
preload_attempts: 250
fits:
flip_for_ds9: true
grid:
remove_projected_centre: false
hpc:
hpc_mode: false
iterations_per_update: 5000
adapt:
adapt_minimum_percent: 0.01
adapt_noise_limit: 100000000.0
inversion:
check_reconstruction: false # If True, the inversion's reconstruction is checked to ensure the solution of a meshs's mapper is not an invalid solution where the values are all the same.
use_positive_only_solver: false # If True, inversion's use a positive-only linear algebra solver by default, which is slower but prevents unphysical negative values in the reconstructed solutuion.
no_regularization_add_to_curvature_diag_value: 1.0e-8 # The default value added to the curvature matrix's diagonal when regularization is not applied to a linear object, which prevents inversion's failing due to the matrix being singular.
positive_only_uses_p_initial: false # If True, the positive-only solver of an inversion's uses an initial guess of the reconstructed data's values as which values should be positive, speeding up the solver.
model:
ignore_prior_limits: true
numba:
cache: true
nopython: true
parallel: false
use_numba: true
output:
force_pickle_overwrite: false
info_whitespace_length: 80
log_file: output.log
log_level: INFO
log_to_file: false
model_results_decimal_places: 3
remove_files: false
samples_to_csv: false
profiling:
perform: true
repeats: 1
test:
check_likelihood_function: true # if True, when a search is resumed the likelihood of a previous sample is recalculated to ensure it is consistent with the previous run.
check_preloads: false
exception_override: false
preloads_check_threshold: 1.0 # If the figure of merit of a fit with and without preloads is greater than this threshold, the check preload test fails and an exception raised for a model-fit.
disable_positions_lh_inversion_check: false