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Commits on Aug 26, 2010

• Added yard stuff to mzIdentML stuff

  JesseJ

  committedAug 26, 2010
  e410234

Commits on Aug 25, 2010

• Some more documentation

  JesseJ

  committedAug 25, 2010
  ff258cb

• Added more documentation and switched to yard's documentation format

  JesseJ

  committedAug 25, 2010
  8f0909b

Commits on Aug 23, 2010

• Added example data structure and made small fix to config.xml

  JesseJ

  committedAug 23, 2010
  bd8c8d2

Commits on Aug 19, 2010

• Some minor edits and more specs

  JesseJ

  committedAug 19, 2010
  c6d3ec3

Commits on Aug 18, 2010

• Memory problem not completely solved, but alleviated some.

  JesseJ

  committedAug 18, 2010
  15315f9

• Worked on modifying percolator phase to fix memory problem, but to no avail.

  JesseJ

  committedAug 18, 2010
  eee51f2

Commits on Aug 16, 2010

• Fixed large raw/mzML problem

  JesseJ

  committedAug 16, 2010
  4ba10ea

• Fixed Mascot/Mechanize bug and added data directories

  JesseJ

  committedAug 16, 2010
  2cfc7b3

Commits on Aug 13, 2010

• Some small refactoring of John's code

  JesseJ

  committedAug 13, 2010
  5203808

Commits on Aug 12, 2010

• I did...er...stuff

  JesseJ

  committedAug 12, 2010
  ccbc91a

Commits on Aug 11, 2010

• Restructured mzIdentML folder

  JesseJ

  committedAug 11, 2010
  e0eb069

• Updated mzIdentML's readme

  JesseJ

  committedAug 11, 2010
  4d02ca6

Commits on Aug 10, 2010

• Refactored main class to allow for simultaneous file runs, arbitrary raw extensions, and arbitrary iteration names.

  JesseJ

  committedAug 10, 2010
  d59452d

Commits on Aug 9, 2010

• Significantly reduced percolator.rb's file loading time

  JesseJ

  committedAug 9, 2010
  05354bc

Commits on Aug 4, 2010

• Added another test case for Resolver

  JesseJ

  committedAug 4, 2010
  f603641

Commits on Aug 3, 2010

• Improved (hopefully) Resolver's algorithm

  JesseJ

  committedAug 3, 2010
  bb94329

Commits on Aug 2, 2010

• Created command line script and implemented config file into katamari_dotei.rb

  JesseJ

  committedAug 2, 2010
  0a3261e

• Began work on new version

  JesseJ

  committedAug 2, 2010
  44fe1c9

• Testing repository change

  JesseJ

  committedAug 2, 2010
  27ce5e7

Commits on Jul 26, 2010

• Modified data directory structure and made a large update to the documentation.

  JesseJ

  committedJul 26, 2010
  173ef5f

Commits on Jul 23, 2010

• Created prototype config file

  JesseJ

  committedJul 23, 2010
  1bba8e0

• Added algorithm to Combiner. Not tested for correctness.

  JesseJ

  committedJul 23, 2010
  0cd20a1

Commits on Jul 21, 2010

• Removed old files

  JesseJ

  committedJul 21, 2010
  20ec4a0

• Added specs

  JesseJ

  committedJul 21, 2010
  57e1e69

Commits on Jul 19, 2010

• Small changes

  JesseJ

  committedJul 19, 2010
  18b3552

• Increased speed of percolator.rb

  JesseJ

  committedJul 19, 2010
  d1b5f4c

Commits on Jul 16, 2010

• SearchToTab now supports mzIdentML, although it's very slow

  JesseJ

  committedJul 16, 2010
  fc548e5

• Updated docs

  JesseJ

  committedJul 16, 2010
  30f9760

• Updated mzIdentML/spec.rb

  JesseJ

  committedJul 16, 2010
  5802e3e

Commits on Jul 15, 2010

• test.mzid finally passes the validator

  JesseJ

  committedJul 15, 2010
  27dbfad

Commits on Jul 14, 2010

• Pipeline now capable of iterating. Working on memory issue.

  JesseJ

  committedJul 14, 2010
  0ef84d8

Commits on Jul 13, 2010

• Further work on Combiner and Refiner

  JesseJ

  committedJul 13, 2010
  8e7d7c7

Commits on Jul 9, 2010

• Began work on refiner

  JesseJ

  committedJul 9, 2010
  6bfa51f

Commits on Jul 8, 2010

• Small changes to Prince's changes

  JesseJ

  committedJul 8, 2010
  e827334

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